LOCUS AEC07812.1 108 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Transmembrane proteins 14C protein.
ACCESSION CP002685-3332
PROTEIN_ID AEC07812.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G26240"
/gene_synonym="T1D16.12"
/gene_synonym="T1D16_12"
/inference="Similar to RNA sequence,
EST:INSD:EL077678.1,INSD:EH830815.1,INSD:EH825017.1,
INSD:AV830832.1,INSD:T04611.1,INSD:BP587671.1,
INSD:EH816726.1,INSD:DR335725.1,INSD:DR375171.1,
INSD:DR335732.1,INSD:AV553104.1,INSD:DR335735.1,
INSD:DR335729.1,INSD:EL048101.1,INSD:BP649182.1,
INSD:DR335734.1,INSD:DR335727.1,INSD:EG497902.1,
INSD:DR335730.1,INSD:BP584047.1,INSD:EL022947.1,
INSD:BP593874.1,INSD:EH813147.1,INSD:DR335740.1,
INSD:EH952567.1,INSD:EL273209.1,INSD:DR335738.1,
INSD:EL249943.1,INSD:EL199121.1,INSD:DR335737.1,
INSD:EH957189.1,INSD:EG497900.1,INSD:EH988800.1,
INSD:BP830323.1,INSD:DR335736.1,INSD:EH938956.1,
INSD:DR335733.1,INSD:DR335739.1,INSD:AV813404.1,
INSD:ES182530.1,INSD:DR335741.1,INSD:EH970401.1,
INSD:DR335742.1,INSD:EH802565.1,INSD:EL175157.1,
INSD:EL171056.1,INSD:EH930684.1,INSD:BP837633.1,
INSD:DR335731.1,INSD:BP810499.1,INSD:EH987657.1,
INSD:ES204482.1,INSD:EL106989.1,INSD:DR335728.1"
/inference="similar to RNA sequence,
mRNA:INSD:BT000271.1,INSD:BX821749.1,INSD:AY072431.1"
/note="Transmembrane proteins 14C; INVOLVED IN:
biological_process unknown; LOCATED IN: mitochondrion;
EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised
protein family UPF0136, Transmembrane
(InterPro:IPR005349); BEST Arabidopsis thaliana protein
match is: Transmembrane proteins 14C (TAIR:AT3G43520.1);
Has 421 Blast hits to 421 proteins in 127 species: Archae
- 0; Bacteria - 39; Metazoa - 202; Fungi - 39; Plants -
124; Viruses - 0; Other Eukaryotes - 17 (source: NCBI
BLink)."
/db_xref="Araport:AT2G26240"
/db_xref="TAIR:AT2G26240"
intron_pos 19:1 (1/2)
intron_pos 64:1 (2/2)
BEGIN
1 MDSSLSQKFT LAYASLLGVG GLMGYLKRGS KISLVAGGGS AALFYYVYTE LPGNPVLASS
61 IGIVGSAALT GMMGSRYLRT RKVVPAGLVS VVSLVMTGAY LHGLIRSS
//