LOCUS AEC07798.1 384 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana RING/U-box protein with C6HC-type
zinc finger protein.
ACCESSION CP002685-3309
PROTEIN_ID AEC07798.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G26135"
/note="RING/U-box protein with C6HC-type zinc finger;
FUNCTIONS IN: zinc ion binding; INVOLVED IN:
biological_process unknown; LOCATED IN: membrane;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger,
RING-type, conserved site (InterPro:IPR017907), Zinc
finger, C6HC-type (InterPro:IPR002867), Zinc finger,
RING-type (InterPro:IPR001841), Zinc finger, C3HC4
RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana
protein match is: RING/U-box protein with C6HC-type zinc
finger (TAIR:AT2G26130.1); Has 35333 Blast hits to 34131
proteins in 2444 species: Archae - 798; Bacteria - 22429;
Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0;
Other Eukaryotes - 9610 (source: NCBI BLink)."
/db_xref="Araport:AT2G26135"
/db_xref="TAIR:AT2G26135"
intron_pos 108:0 (1/3)
intron_pos 141:0 (2/3)
intron_pos 333:2 (3/3)
BEGIN
1 MEEEGTLVRA DNLKHAGTPS PSKFSPYSLY FKGLVSEESP KLSAEFRVAI CGYKDGLMFQ
61 MKGPIHDSAI TLLEAELMAL KYGLSEAVTL GINHISICCD NNQIFEWVMG RSTPQEENIA
121 MLIRDVQGIR KQFTSSIAVL IDVPALFHPK KTCTICFDDD INADMMFYID QCGHMFCSEC
181 VKRHIEVSLL QGSLITCPSY RCKSKLTYGS CVNILTPKVK EMWIQRMGED SIPVTDRVYC
241 PNPTCSALMS VTELDQLTGS KRCCVKCGES FCIKCKVPWH DNLSCKRYKK LHSNRTTNDK
301 QLNELANQES WRQCSKCKHM IELTQGCVRV ICRCGHEFCY GCGADAGCCS HGHVPYFSVE
361 RREPEVQALV LIGVVVVTMI FFFR
//