LOCUS AEC07790.1 352 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Transducin/WD40 repeat-like superfamily
protein protein.
ACCESSION CP002685-3299
PROTEIN_ID AEC07790.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="emb1345"
/locus_tag="AT2G26060"
/gene_synonym="CIA1"
/gene_synonym="Cytosolic Iron-sulfur protein Assembly 1"
/gene_synonym="embryo defective 1345"
/gene_synonym="T19L18.13"
/gene_synonym="T19L18_13"
/inference="Similar to RNA sequence,
EST:INSD:BP803416.1,INSD:CB185825.1,INSD:BP799638.1,
INSD:DR286117.1,INSD:DR286119.1,INSD:ES111059.1,
INSD:BP581378.1,INSD:BE520638.1,INSD:ES205742.1,
INSD:BP798233.1,INSD:BE520637.1,INSD:BP785708.1,
INSD:ES058335.1,INSD:EH980849.1,INSD:EH868453.1,
INSD:DR286120.1,INSD:BP573217.1,INSD:BP616954.1,
INSD:EL249237.1,INSD:BP579638.1,INSD:BP671235.1,
INSD:AI999593.1,INSD:BP810738.1,INSD:EL022103.1,
INSD:BP579528.1,INSD:BP623399.1,INSD:AV828601.1,
INSD:ES206461.1,INSD:DR286118.1,INSD:DR380705.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY085277.1,INSD:AY093154.1,INSD:BT003394.1,
INSD:BX821919.1"
/note="embryo defective 1345 (emb1345); CONTAINS InterPro
DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat,
conserved site (InterPro:IPR019775), WD40 repeat
(InterPro:IPR001680), G-protein beta WD-40 repeat, region
(InterPro:IPR020472), WD40 repeat-like-containing domain
(InterPro:IPR011046), WD40-repeat-containing domain
(InterPro:IPR017986), WD40/YVTN repeat-like-containing
domain (InterPro:IPR015943), WD40 repeat, subgroup
(InterPro:IPR019781); BEST Arabidopsis thaliana protein
match is: Transducin/WD40 repeat-like superfamily protein
(TAIR:AT4G32990.1); Has 69948 Blast hits to 29854 proteins
in 810 species: Archae - 58; Bacteria - 8000; Metazoa -
27493; Fungi - 15911; Plants - 9301; Viruses - 0; Other
Eukaryotes - 9185 (source: NCBI BLink)."
/db_xref="Araport:AT2G26060"
/db_xref="TAIR:AT2G26060"
intron_pos 67:0 (1/9)
intron_pos 116:0 (2/9)
intron_pos 189:0 (3/9)
intron_pos 210:2 (4/9)
intron_pos 232:2 (5/9)
intron_pos 256:2 (6/9)
intron_pos 277:2 (7/9)
intron_pos 301:0 (8/9)
intron_pos 329:0 (9/9)
BEGIN
1 MDLMEKNLEL VEIQKLEGHT DRVWSVAWNP VSSHADGVSP ILASCSGDNT VRIWEQSSLS
61 RSWTCKTVLE ETHTRTVRSC AWSPSGQLLA TASFDGTTGI WKNYGSEFEC ISTLEGHENE
121 VKSVSWNASG SCLATCSRDK SVWIWEVLEG NEYDCAAVLT GHTQDVKMVQ WHPTMDVLFS
181 CSYDNTIKVW WSEDDDGEYQ CVQTLGESNN GHSSTVWSIS FNAAGDKMVT CSDDLTLKIW
241 GTDIAKMQSG EEYAPWIHLC TLSGYHDRTI YSAHWSRDDI IASGAGDNAI RLFVDSKHDS
301 VDGPSYNLLL KKNKAHENDV NSVQWSPGEG NRLLASASDD GMVKIWQLAT KP
//