LOCUS AEC07787.1 442 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana F-box/RNI-like/FBD-like domains-containing
protein protein.
ACCESSION CP002685-3293
PROTEIN_ID AEC07787.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G26030"
/gene_synonym="T19L18.16"
/gene_synonym="T19L18_16"
/inference="Similar to RNA sequence,
EST:INSD:EG445263.1,INSD:EG445252.1,INSD:EL008897.1,
INSD:AV556120.1,INSD:CB074604.1,INSD:EL164345.1,
INSD:BP849402.1,INSD:EG445261.1,INSD:EG445267.1,
INSD:EG445257.1,INSD:EG445259.1"
/inference="similar to RNA sequence,
mRNA:INSD:AK176562.1,INSD:AY649316.1"
/note="F-box/RNI-like/FBD-like domains-containing protein;
CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596),
F-box domain, cyclin-like (InterPro:IPR001810), FBD-like
(InterPro:IPR006566), F-box domain, Skp2-like
(InterPro:IPR022364), Leucine-rich repeat 2
(InterPro:IPR013101); BEST Arabidopsis thaliana protein
match is: F-box/RNI-like/FBD-like domains-containing
protein (TAIR:AT5G44950.1); Has 35333 Blast hits to 34131
proteins in 2444 species: Archae - 798; Bacteria - 22429;
Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0;
Other Eukaryotes - 9610 (source: NCBI BLink)."
/db_xref="Araport:AT2G26030"
/db_xref="TAIR:AT2G26030"
intron_pos 304:0 (1/2)
intron_pos 351:0 (2/2)
BEGIN
1 MNCDRICELP DSLLTQVLSY LPTIDSVKTS VLSKRWEFLW LRVPVLDLKV SDFPDENYAS
61 FIDNFLEFNR KSRMRKFKLK YDEYTYDDDR LAGWVVTTVD RGIQHLDAKG FETNMCVREF
121 MPQNIYKCNT LVSLMLVTVG IENPEFVVSL PSLKIMHLED VWYYDDPLIM EKIISGCPVL
181 EDFVLIRPID FCNLDVLQFL RVRSLSLRSF RLTFEYSVSC TYFSVEIDAP RLEYLNFNDD
241 QSDTIVVKNM TSLSMIDIDS EFNVKFGGSR LEPGDLRKRD IIRDFLTAIS CVRHMIISRR
301 TLEVLDRYSK LVPIPKFDNL YRLQAAVSRS MLQLLLVFLE SCPNLENLIL DFTVSTEPEQ
361 DGLTYVPQCL LSSLECVEIR ELIMGEETGE KLVRYFLKNS VVLKKLILRL EDSSIANQDS
421 DIFKELSTFT KRSRSCEVII IH
//