LOCUS AEC07783.1 80 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana plant defensin 1.3 protein.
ACCESSION CP002685-3290
PROTEIN_ID AEC07783.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="PDF1.3"
/locus_tag="AT2G26010"
/gene_synonym="plant defensin 1.3"
/gene_synonym="T19L18.18"
/gene_synonym="T19L18_18"
/inference="Similar to RNA sequence,
EST:INSD:EG486645.1,INSD:EG486709.1,INSD:EG486737.1,
INSD:EH951698.1,INSD:EL330362.1,INSD:EG486742.1,
INSD:EG486616.1,INSD:EL192803.1,INSD:EG486738.1,
INSD:EG486740.1,INSD:EL256416.1,INSD:EG486739.1,
INSD:EG486736.1,INSD:EG486715.1"
/note="plant defensin 1.3 (PDF1.3); FUNCTIONS IN:
molecular_function unknown; INVOLVED IN: defense response;
LOCATED IN: endomembrane system, cell wall; CONTAINS
InterPro DOMAIN/s: Gamma thionin (InterPro:IPR008176),
Knottin (InterPro:IPR003614); BEST Arabidopsis thaliana
protein match is: plant defensin 1.2C (TAIR:AT5G44430.1);
Has 195 Blast hits to 195 proteins in 48 species: Archae -
0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 194;
Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink)."
/db_xref="Araport:AT2G26010"
/db_xref="TAIR:AT2G26010"
intron_pos 22:1 (1/1)
BEGIN
1 MAKSAAIITF LFAALVLFAA FEAPIMVEAQ KLCEKPSGTW SGVCGNSNAC KNQCINLEGA
61 KHGSCNYVFP AHKCICYFPC
//