LOCUS AEC07781.1 461 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana zinc finger (C3HC4-type RING finger)
family protein protein.
ACCESSION CP002685-3289
PROTEIN_ID AEC07781.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="BRIZ2"
/locus_tag="AT2G26000"
/gene_synonym="BRAP2 RING ZnF UBP domain-containing
protein 2"
/gene_synonym="T19L18.19"
/gene_synonym="T19L18_19"
/inference="Similar to RNA sequence,
EST:INSD:ES120428.1,INSD:EG456128.1,INSD:ES065255.1,
INSD:ES064849.1,INSD:EL158674.1,INSD:ES070560.1,
INSD:EL046178.1"
/note="BRAP2 RING ZnF UBP domain-containing protein 2
(BRIZ2); FUNCTIONS IN: catalytic activity, zinc ion
binding; LOCATED IN: chloroplast; EXPRESSED IN: 10 plant
structures; EXPRESSED DURING: 4 anthesis, F mature embryo
stage, petal differentiation and expansion stage, E
expanded cotyledon stage, D bilateral stage; CONTAINS
InterPro DOMAIN/s: BRCA1-associated 2
(InterPro:IPR011422), Zinc finger, UBP-type
(InterPro:IPR001607), Zinc finger, RING-type
(InterPro:IPR001841); BEST Arabidopsis thaliana protein
match is: zinc finger (ubiquitin-hydrolase)
domain-containing protein (TAIR:AT2G42160.1); Has 35333
Blast hits to 34131 proteins in 2444 species: Archae -
798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants
- 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI
BLink)."
/db_xref="Araport:AT2G26000"
/db_xref="TAIR:AT2G26000"
intron_pos 56:0 (1/10)
intron_pos 94:2 (2/10)
intron_pos 131:0 (3/10)
intron_pos 172:1 (4/10)
intron_pos 205:0 (5/10)
intron_pos 240:2 (6/10)
intron_pos 323:0 (7/10)
intron_pos 371:0 (8/10)
intron_pos 392:2 (9/10)
intron_pos 411:0 (10/10)
BEGIN
1 MNSASVSGES SLSDMIQTVH FSSGNPRIGE TRGVMHLISD NAVSSSSSSS SSNLPIGRNP
61 LVCVLGVPNH MTYADFCQFC GSFIQHILDM RTVRNDDIEN RYSILIRFDS QESTDTFFQH
121 FRGKQFNSLD EDVCRLLFAL DVQFTGYSGS IDHTQPSAAG PIEQPTCPVC LERLDQDTGG
181 ILTTMCNHSF HCSCISNWPD SSCPVCRYCQ QQPENSVCCV CQTTENLWMC VICGVVGCGR
241 YKEGHARRHW EETEHCYSLE LETQRVWDYA GDNYVHRLIQ SKTDGKLVEL NSHGSLSKDG
301 CGSCEYSDSG MTDALLNSKV DMYFEKLLQN VKEETEQKIS EAASKAISQR LQKLQTRFDR
361 CVKEKQFLED LNENLVKNKD VWSTKITEMK EREKKAVRAK DEKIQGLEEQ LGNLMAQMDG
421 ESEVSETKEV QDATVSTTNT SSSGAGNVIH ANKKKSNRRK G
//