LOCUS AEC07773.1 280 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana pollen-specific LRR extensin-like
protein protein.
ACCESSION CP002685-3277
PROTEIN_ID AEC07773.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G25920"
/gene_synonym="F17H15.5"
/gene_synonym="F17H15_5"
/inference="Similar to RNA sequence,
EST:INSD:ES060061.1,INSD:EL201696.1,INSD:ES091469.1,
INSD:BP615844.1,INSD:DR231053.1,INSD:DR368284.1,
INSD:AV824165.1,INSD:BP628332.1,INSD:DR368285.1,
INSD:EH968853.1,INSD:EL085226.1,INSD:AV785339.1,
INSD:DR384003.1"
/inference="similar to RNA sequence,
mRNA:INSD:BX819227.1,INSD:BT000867.1,INSD:AF410337.1"
/note="BEST Arabidopsis thaliana protein match is: 3'-5'
exonuclease domain-containing protein / K homology
domain-containing protein / KH domain-containing protein
(TAIR:AT2G25910.2); Has 131 Blast hits to 125 proteins in
54 species: Archae - 0; Bacteria - 50; Metazoa - 12; Fungi
- 12; Plants - 41; Viruses - 0; Other Eukaryotes - 16
(source: NCBI BLink)."
/db_xref="Araport:AT2G25920"
/db_xref="TAIR:AT2G25920"
intron_pos 19:1 (1/3)
intron_pos 66:0 (2/3)
intron_pos 98:2 (3/3)
BEGIN
1 MTSSSPTQRT HVSIPPEPGG KSLTQEANEP PVPISVSSPC GKRTRDPEDE VYLDNLRSQK
61 RYLSEIMACS LNGLTVGDSL PVNMLESPAR SESFLYHRDD LSLQYSPMSE DSDEARFCED
121 PTATASTSSS QPESRPTSPV SPYRYQRPLT STNSPQPSPT ILHHSHTCPA SMISNAATTT
181 TPQSRQRGSD TEGRFPSSPS DICHSGDLRR TALLRSVQMR TQPCGYSSSS GPSNIDGEER
241 MCSKSMEEDR GYNKGEDIPY AEVSSKSKSC KALDMRLCEK
//