LOCUS AEC07771.1 341 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana 3'-5' exonuclease domain-containing
protein / K homology domain-containing protein / KH domain-
containing protein protein.
ACCESSION CP002685-3275
PROTEIN_ID AEC07771.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G25910"
/gene_synonym="F17H15.6"
/gene_synonym="F17H15_6"
/inference="Similar to RNA sequence,
EST:INSD:EL222323.1,INSD:AV800925.1,INSD:AV550576.1,
INSD:AV538323.1,INSD:BP844453.1,INSD:ES023778.1,
INSD:AV563314.1,INSD:BP858169.1,INSD:AV827109.1,
INSD:Z24481.1,INSD:ES038022.1,INSD:EL161963.1,
INSD:DR330934.1,INSD:DR330936.1,INSD:DR330929.1,
INSD:EL244186.1,INSD:BP636397.1,INSD:DR330938.1,
INSD:EL297032.1,INSD:EL317837.1,INSD:EL041258.1,
INSD:ES208240.1,INSD:BP563674.1,INSD:EH831181.1,
INSD:DR330928.1,INSD:DR330939.1,INSD:AV440478.1,
INSD:AV561455.1,INSD:AV527848.1,INSD:DR374119.1,
INSD:EL167919.1,INSD:BP660473.1,INSD:BP642052.1,
INSD:BX839504.1,INSD:BP571477.1,INSD:DR330935.1,
INSD:EL134393.1,INSD:EL972463.1,INSD:R90138.1,
INSD:EL041462.1,INSD:BP665855.1,INSD:DR330927.1,
INSD:ES110004.1,INSD:DR330930.1,INSD:H36754.1,
INSD:ES152773.1,INSD:EH886076.1,INSD:ES137980.1,
INSD:ES000277.1,INSD:ES022090.1,INSD:EH867541.1,
INSD:DR330926.1,INSD:CF651256.1,INSD:AV798734.1,
INSD:BP851696.1,INSD:EL285829.1,INSD:EL234879.1,
INSD:EL014516.1,INSD:AV797266.1,INSD:AI999680.1,
INSD:BP842324.1,INSD:BP648783.1,INSD:EL254848.1,
INSD:AV527534.1,INSD:DR330933.1,INSD:EH915384.1,
INSD:BP648056.1,INSD:EL093449.1,INSD:ES133448.1,
INSD:EL077933.1,INSD:DR330937.1,INSD:EH919310.1"
/inference="similar to RNA sequence,
mRNA:INSD:BX820159.1,INSD:AY074840.1,INSD:AY086659.1,
INSD:AF361606.1"
/note="3'-5' exonuclease domain-containing protein / K
homology domain-containing protein / KH domain-containing
protein; FUNCTIONS IN: 3'-5' exonuclease activity, RNA
binding, nucleic acid binding; INVOLVED IN: nucleobase,
nucleoside, nucleotide and nucleic acid metabolic process;
LOCATED IN: intracellular; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: K Homology (InterPro:IPR004087), K
Homology, type 1, subgroup (InterPro:IPR018111), K
Homology, type 1 (InterPro:IPR004088), Polynucleotidyl
transferase, ribonuclease H fold (InterPro:IPR012337),
3'-5' exonuclease (InterPro:IPR002562); BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G25920.1); Has 1067 Blast hits to 1067 proteins
in 347 species: Archae - 0; Bacteria - 413; Metazoa - 196;
Fungi - 59; Plants - 125; Viruses - 0; Other Eukaryotes -
274 (source: NCBI BLink)."
/db_xref="Araport:AT2G25910"
/db_xref="TAIR:AT2G25910"
intron_pos 19:1 (1/9)
intron_pos 78:0 (2/9)
intron_pos 122:0 (3/9)
intron_pos 139:0 (4/9)
intron_pos 171:1 (5/9)
intron_pos 187:0 (6/9)
intron_pos 260:1 (7/9)
intron_pos 303:2 (8/9)
intron_pos 318:0 (9/9)
BEGIN
1 MASSSPTQLA HVPIPPEPGG RSPTQEANEP PVPIYIVTDP FQLPADFLNP SPEKKLVIGF
61 DCEGVDLCRH GKLCIMQIAF SNAIYLVDVI EGGEVIMKAC KPALESNYIT KVIHDCKRDS
121 EALYFQFGIR LHNVVDTQIA YSLIEEQEGR RRPLDDYISF VSLLADPRYC GISYEEKEEV
181 RVLMRQDPKF WTYRPMTELM IRAAADDVRF LLYLYHKMMG KLNQRSLWHL AVRGALYCRC
241 LCCMNDADFA DWPTVPPIPD NLKSEDQCLE EEILSVLDVP PGKMGRVIGR KGASILAIKE
301 ACNAEILIGG AKGPPDKIFV IGPVREVRKA EAILRGRMID Y
//