LOCUS AEC07757.1 331 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana YebC-like protein protein.
ACCESSION CP002685-3251
PROTEIN_ID AEC07757.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G25830"
/gene_synonym="F17H15.14"
/gene_synonym="F17H15_14"
/inference="Similar to RNA sequence,
EST:INSD:EL316526.1,INSD:DR384074.1,INSD:CD531199.1,
INSD:DR366284.1,INSD:EL136335.1,INSD:EH882159.1,
INSD:DR366283.1,INSD:AV794146.1,INSD:BP852405.1,
INSD:EH815677.1,INSD:EL029548.1,INSD:BP825534.1,
INSD:ES121663.1,INSD:BP627354.1,INSD:AV826243.1,
INSD:EL027950.1,INSD:BP805324.1,INSD:BP617792.1,
INSD:DR382262.1,INSD:EL041998.1,INSD:EL183345.1,
INSD:ES205253.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY056230.1,INSD:AY114086.1"
/note="YebC-related; LOCATED IN: chloroplast; EXPRESSED
IN: 23 plant structures; EXPRESSED DURING: 13 growth
stages; CONTAINS InterPro DOMAIN/s: Protein of unknown
function DUF28 (InterPro:IPR002876), Integrase, N-terminal
zinc-binding domain-like (InterPro:IPR017856); Has 8692
Blast hits to 8692 proteins in 2830 species: Archae - 0;
Bacteria - 6166; Metazoa - 76; Fungi - 120; Plants - 47;
Viruses - 0; Other Eukaryotes - 2283 (source: NCBI
BLink)."
/db_xref="Araport:AT2G25830"
/db_xref="TAIR:AT2G25830"
intron_pos 96:0 (1/5)
intron_pos 116:2 (2/5)
intron_pos 169:0 (3/5)
intron_pos 261:2 (4/5)
intron_pos 302:0 (5/5)
BEGIN
1 MASHCSMRVI LLRFSNGVSS RSILNSTNHR LLSLTMTNTL SSLSSISPHT TTSHFTAASQ
61 QSDDQNCFRK LQLRKISIST PLCMGRRSSK IAGRKGAQDS KKAKLYCRIG KEVVSAVKKG
121 GPNPVSNTTL ATILDKAKEL DVPKDIVERN IKRASEKGQE AFIEKIYEVY GYGGVSMVVE
181 VLTDKINRSV AAIRSVVKDY GGKMADSGSV MFKFKRVRVV NIKVTEADKD QLLIIALDAG
241 AEDVIEPPTY EDDTDEDREE RYYKIVTSNE NYSTILSKLR DEGVNFEPDN GSELLPLTTV
301 EVDDEAMELN KELMQKLLEL DDVDAVYIDQ K
//