LOCUS AEC07739.1 163 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana SKP1-like 3 protein.
ACCESSION CP002685-3223
PROTEIN_ID AEC07739.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="SK3"
/locus_tag="AT2G25700"
/gene_synonym="ASK3"
/gene_synonym="F3N11.15"
/gene_synonym="F3N11_15"
/gene_synonym="SKP1-like 3"
/inference="Similar to RNA sequence,
EST:INSD:AV824667.1,INSD:AV787189.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY052700.1,INSD:AY139806.1"
/note="SKP1-like 3 (SK3); FUNCTIONS IN: ubiquitin-protein
ligase activity, protein binding; INVOLVED IN:
ubiquitin-dependent protein catabolic process; LOCATED IN:
cellular_component unknown; EXPRESSED IN: sepal, seed
coat, pedicel, valve; CONTAINS InterPro DOMAIN/s: E3
ubiquitin ligase, SCF complex, Skp subunit
(InterPro:IPR016897), SKP1 component, dimerisation
(InterPro:IPR016072), SKP1 component (InterPro:IPR001232),
BTB/POZ fold (InterPro:IPR011333), SKP1 component, POZ
(InterPro:IPR016073); BEST Arabidopsis thaliana protein
match is: SKP1-like 4 (TAIR:AT1G20140.1); Has 1425 Blast
hits to 1421 proteins in 267 species: Archae - 0; Bacteria
- 0; Metazoa - 551; Fungi - 177; Plants - 528; Viruses -
11; Other Eukaryotes - 158 (source: NCBI BLink)."
/db_xref="Araport:AT2G25700"
/db_xref="TAIR:AT2G25700"
intron_pos 107:0 (1/1)
BEGIN
1 MAETKKMIIL KSSDGESFEV EEAVAVESQT IKHMIEDDCV DNGIPLPNVT GAILAKVIEY
61 CKKHVEAAAE AGGDKDFYGS TENHELKTWD NDFVKVDHPT LFDLLRAANY LNISGLLDLT
121 CKAVADQMRG KTPAQMREHF NIKNDYTPEE EAEVRNENRW AFE
//