LOCUS AEC07720.1 615 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Tetratricopeptide repeat (TPR)-like
superfamily protein protein.
ACCESSION CP002685-3198
PROTEIN_ID AEC07720.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="MEF8"
/locus_tag="AT2G25580"
/gene_synonym="F3N11.3"
/gene_synonym="F3N11_3"
/gene_synonym="mitochondrial editing factor 8"
/inference="Similar to RNA sequence,
EST:INSD:EL113658.1,INSD:EH992089.1,INSD:ES073743.1,
INSD:ES178775.1,INSD:BP820198.1,INSD:ES073761.1,
INSD:ES094102.1"
/inference="similar to RNA sequence, mRNA:INSD:AK175894.1"
/note="Tetratricopeptide repeat (TPR)-like superfamily
protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide
repeat (InterPro:IPR002885); BEST Arabidopsis thaliana
protein match is: Pentatricopeptide repeat (PPR)
superfamily protein (TAIR:AT4G32450.1); Has 21306 Blast
hits to 10572 proteins in 176 species: Archae - 0;
Bacteria - 9; Metazoa - 6; Fungi - 21; Plants - 21172;
Viruses - 0; Other Eukaryotes - 98 (source: NCBI BLink)."
/db_xref="Araport:AT2G25580"
/db_xref="TAIR:AT2G25580"
BEGIN
1 MYTKLSLFPR KSSSLLSIAN EKRIHQFLRN LCTAVERLDF GNSNDSSEMN PREGYNGRIQ
61 NRTGSSGEVS ESIHTQSQSL GSNQGRNEQS WKQSPSLSNS QVQSQYQGNW YGTNSDYQNG
121 VGSSWHSGKT IDREVYDMIM EFDEYCIQEN VRVALTTMEK LEKKGYVMDF VRLLKLTQLC
181 REGNVYYEVS VLEEAKVSVL AKIRALVNNL EANYLKYYTD IMIEEYDAFC KHGKVKKALY
241 TIDILASMNY VVDLSRLLRL AKICGEAEGL QEAKTVHGKI SASVSHLDLS SNHVLLEMYS
301 NCGLANEAAS VFEKMSEKNL ETWCIIIRCF AKNGFGEDAI DMFSRFKEEG NIPDGQLFRG
361 IFYACGMLGD VDEGLLHFES MSRDYGIAPS IEDYVSLVEM YALPGFLDEA LEFVERMPME
421 PNVDVWETLM NLSRVHGNLE LGDYCAEVVE FLDPTRLNKQ SREGFIPVKA SDVEKESLKK
481 RSGILHGVKS SMQEFRAGDT NLPENDELFQ LLRNLKMHMV EVGYVAETRM ALHDIDQESK
541 ETLLLGHSER IAFARAVLNS APRKPFTVIK NLRVCVDCHN ALKIMSDIVG REVITRDIKR
601 FHQMKNGACT CKDYW
//