LOCUS AEC07698.1 377 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana RING/U-box superfamily protein protein.
ACCESSION CP002685-3167
PROTEIN_ID AEC07698.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G25410"
/gene_synonym="F13B15.7"
/inference="Similar to RNA sequence,
EST:INSD:EG436022.1,INSD:EG436024.1,INSD:EG428561.1,
INSD:EG444396.1,INSD:EG444286.1,INSD:EG444293.1,
INSD:EG436010.1,INSD:EG444397.1,INSD:EG444395.1,
INSD:EG444356.1,INSD:EG435946.1,INSD:EG428562.1,
INSD:EG436014.1,INSD:EG436020.1,INSD:EG436011.1,
INSD:EG436019.1,INSD:EG435979.1,INSD:EG428587.1,
INSD:EG428564.1,INSD:EG428583.1,INSD:EG428588.1,
INSD:EG436016.1"
/inference="similar to RNA sequence, mRNA:INSD:AY461616.1"
/note="RING/U-box superfamily protein; FUNCTIONS IN: zinc
ion binding; INVOLVED IN: biological_process unknown;
LOCATED IN: endomembrane system; CONTAINS InterPro
DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841);
BEST Arabidopsis thaliana protein match is: RING/U-box
superfamily protein (TAIR:AT2G46495.1); Has 9108 Blast
hits to 9082 proteins in 297 species: Archae - 0; Bacteria
- 0; Metazoa - 2133; Fungi - 633; Plants - 5126; Viruses -
43; Other Eukaryotes - 1173 (source: NCBI BLink)."
/db_xref="Araport:AT2G25410"
/db_xref="TAIR:AT2G25410"
intron_pos 233:1 (1/1)
BEGIN
1 MTSKLLPLLL NLIFLFFFPL LNASEQKPCY SFSCSQESVV ARFPFSLFSY QPESCGYSGF
61 NLICKDDANT TLKLPKSEPF LVKEIDYETQ RIRLNDPENC LARRLLNFDP SGSPFSFLRS
121 RNYTFLICPK EANITASFRA IDCLGNTTSS FFVVQFENLG SMPSSCHIFK ILPLPFSWFV
181 AYTTYPDGQN SRDMWLKWDS PDCRDCERRT NSRCGFKNNT SHQVECFSSV NPGLHNTGLQ
241 VLKIMCLSLV GPLTALTFCV GLVMCSSERV SSQIQQAVVA RLSGSVTSQP SNEVARIGLD
301 ESTIESYKKV ELGESRRLPT GSNDVVCPIC LSEYATKETV RCLPECEHCF HTECIDAWLK
361 LHSSCPVCRS NPSPLRD
//