LOCUS AEC07689.1 693 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana TRAF-like family protein protein.
ACCESSION CP002685-3154
PROTEIN_ID AEC07689.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G25330"
/gene_synonym="T22F11.8"
/gene_synonym="T22F11_8"
/inference="Similar to RNA sequence,
EST:INSD:EG485278.1,INSD:Z18523.1"
/note="TRAF-like family protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
CONTAINS InterPro DOMAIN/s: TRAF-like
(InterPro:IPR008974), MATH (InterPro:IPR002083); BEST
Arabidopsis thaliana protein match is: TRAF-like family
protein (TAIR:AT2G25320.1); Has 1667 Blast hits to 814
proteins in 121 species: Archae - 0; Bacteria - 0; Metazoa
- 187; Fungi - 112; Plants - 1267; Viruses - 0; Other
Eukaryotes - 101 (source: NCBI BLink)."
/db_xref="Araport:AT2G25330"
/db_xref="TAIR:AT2G25330"
intron_pos 404:1 (1/3)
intron_pos 660:0 (2/3)
intron_pos 689:1 (3/3)
BEGIN
1 MLSSSSSAAD QSHPSISSEK PLSSSRDESG GAQEIVAVDR PGEYTALCRW TVESFTRVKA
61 KALWSKYFDV GGYDCRLLVY PRGDSQALPG SISIYLQIID PRGTSSSLWD CFASYQLSII
121 NHVDDSLTIR KNSWHRFSNK KRSHGWCDFT LNSSVLDPKM GFLFNNDSLL ITADIMILNE
181 SVSFSIDNNN ESVVGSMTDV LSGTFTWTVE NFSMFKEMIK TQKITSPVFV AGECFLRIGV
241 YQSVVNAQEY FSMCLDSTDT EKSVLSDKSS WCLFSMSALN QKHGCTNMNK ESYGRFAADN
301 KSGDNTGLGW NDYMKMSDFV NPDAGYLLDD KAVFSTSFDV IKEFSSFTKN GTGNGYMGKF
361 SWRIENFTSL VDLLEKRKIT GLYIKSKRFQ IGNRDCRLIV YPRGQSQPPS HLSIFLEVTD
421 SRSSSSDWSC FVSHRLSVVN QRSEEKSVTK ESQNRFSKAE KDWGWREFVT LTSLFDQDSG
481 FLVQDSVVFS VEVLMLKETS LTKDYTEAES ASSVSQIDKT VKSSFTWKVE NFLAFKGIME
541 KRKIFSKFFQ AGGCELRIGV YESFDTICIY LESGQSAGND VDNNLWVKYK MGILNQKNPA
601 KSVWKESSLC TKTWNNSVLL FMKVSDMLEA DAGFLVRDTL VFVCEILDCC PWFEFSDLEV
661 LASDDVQDAL TTNPDEVIGS EKSEEDTFRQ VSP
//