LOCUS AEC07671.1 44 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Ribosomal protein L39 family protein protein.
ACCESSION CP002685-3124
PROTEIN_ID AEC07671.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G25210"
/gene_synonym="T22F11.20"
/gene_synonym="T22F11_20"
/inference="Similar to RNA sequence,
EST:INSD:DR337172.1,INSD:DR337175.1,INSD:AV821846.1,
INSD:ES049141.1,INSD:BP668374.1,INSD:DR337170.1,
INSD:DR337118.1,INSD:BP866119.1,INSD:DR337051.1,
INSD:EG499439.1,INSD:ES028955.1,INSD:EL991290.1,
INSD:ES088975.1,INSD:EH986263.1,INSD:EH889503.1,
INSD:AV814355.1,INSD:AV782407.1,INSD:EL150875.1,
INSD:EL057543.1,INSD:ES154834.1,INSD:EL035139.1,
INSD:EH965547.1,INSD:DR337117.1,INSD:DR277875.1,
INSD:DR337049.1,INSD:BP869077.1,INSD:DR337133.1,
INSD:ES068621.1,INSD:EH820297.1,INSD:ES129205.1,
INSD:DR337129.1,INSD:BP845470.1,INSD:BP859306.1,
INSD:EL020647.1,INSD:AA720102.1,INSD:DR337177.1,
INSD:EL048260.1,INSD:DR277858.1,INSD:DR337076.1,
INSD:DR337042.1,INSD:ES206947.1,INSD:BP669690.1,
INSD:DR337063.1,INSD:EL061496.1,INSD:DR337102.1,
INSD:DR337151.1,INSD:DR277862.1,INSD:ES094766.1,
INSD:DR277865.1,INSD:EL026993.1,INSD:EL271445.1,
INSD:ES089498.1,INSD:EL311296.1,INSD:EL105832.1,
INSD:EL223558.1,INSD:DR277877.1,INSD:EH976465.1,
INSD:DR337071.1,INSD:DR207587.1,INSD:DR337135.1,
INSD:BE038587.1,INSD:ES178943.1,INSD:DR337152.1,
INSD:DR337096.1,INSD:DR277873.1,INSD:EL263552.1,
INSD:DR337092.1,INSD:DR277868.1,INSD:ES186489.1,
INSD:DR337081.1,INSD:DR337167.1,INSD:BP647911.1,
INSD:BP646875.1,INSD:DR274801.1,INSD:DR337119.1,
INSD:EL980105.1,INSD:BP866128.1,INSD:DR277866.1,
INSD:EL145274.1,INSD:AA720094.1,INSD:EL995921.1,
INSD:DR337113.1,INSD:DR277864.1,INSD:EL989396.1,
INSD:EL207955.1,INSD:ES184737.1,INSD:EH839228.1,
INSD:ES074495.1,INSD:ES041614.1,INSD:DR337178.1,
INSD:EL011131.1,INSD:ES164440.1,INSD:EL177486.1,
INSD:EL048004.1,INSD:DR337104.1,INSD:EH897394.1,
INSD:DR337142.1,INSD:DR337144.1,INSD:DR337074.1,
INSD:DR337148.1,INSD:DR337066.1,INSD:DR277876.1,
INSD:BP662691.1,INSD:DR337089.1,INSD:DR277874.1,
INSD:DR337061.1,INSD:DR337065.1,INSD:EH873260.1,
INSD:DR337084.1,INSD:DR277859.1,INSD:DR337067.1,
INSD:EL112928.1,INSD:DR337064.1,INSD:DR323589.1,
INSD:EL087289.1,INSD:DR337046.1,INSD:EH844924.1,
INSD:ES068272.1,INSD:EL031071.1,INSD:DR337094.1,
INSD:DR277867.1,INSD:EL113884.1,INSD:EG499441.1,
INSD:DR277871.1,INSD:EH821714.1,INSD:BP864532.2,
INSD:DR277861.1,INSD:EL007056.1,INSD:EL311097.1,
INSD:DR337108.1,INSD:EL064465.1,INSD:DR337050.1,
INSD:DR277870.1,INSD:DR337040.1,INSD:DR277863.1,
INSD:EL264025.1,INSD:DR337048.1,INSD:AV790272.1,
INSD:DR337124.1,INSD:DR337138.1,INSD:DR277869.1,
INSD:BP796954.1,INSD:DR337131.1,INSD:DR337127.1,
INSD:DR277857.1,INSD:DR232310.1,INSD:DR337143.1,
INSD:Z17538.1,INSD:BP849401.1,INSD:EH921754.1,
INSD:ES020523.1,INSD:DR225140.1,INSD:EH894205.1,
INSD:DR277856.1,INSD:DR337155.1,INSD:ES095311.1,
INSD:EL035881.1,INSD:DR277860.1,INSD:DR274800.1,
INSD:ES064665.1,INSD:EL019205.1,INSD:ES163299.1,
INSD:EH990043.1,INSD:DR337056.1,INSD:ES042862.1,
INSD:DR277872.1,INSD:DR337097.1,INSD:ES094025.1,
INSD:BP847226.1,INSD:BP862768.1,INSD:ES046787.1"
/inference="similar to RNA sequence,
mRNA:INSD:BX820797.1,INSD:BX821672.1,INSD:AK226226.1,
INSD:BX822013.1"
/note="Ribosomal protein L39 family protein; FUNCTIONS IN:
structural constituent of ribosome; INVOLVED IN:
translation; LOCATED IN: ribosome, cytosolic large
ribosomal subunit; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Ribosomal protein L39e, conserved site
(InterPro:IPR020083), Ribosomal protein L39e
(InterPro:IPR000077); BEST Arabidopsis thaliana protein
match is: Ribosomal protein L39 family protein
(TAIR:AT4G31985.1); Has 908 Blast hits to 908 proteins in
288 species: Archae - 195; Bacteria - 0; Metazoa - 389;
Fungi - 107; Plants - 121; Viruses - 0; Other Eukaryotes -
96 (source: NCBI BLink)."
/db_xref="Araport:AT2G25210"
/db_xref="TAIR:AT2G25210"
intron_pos 29:2 (1/1)
BEGIN
1 MIKKKLGKKM RQNRPIPHWI RLRTDNTIRY NAKRRHWRRT KLGF
//