LOCUS AEC07658.1 277 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Polynucleotidyl transferase, ribonuclease
H-like superfamily protein protein.
ACCESSION CP002685-3106
PROTEIN_ID AEC07658.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G25100"
/gene_synonym="F13D4.60"
/gene_synonym="F13D4_60"
/inference="Similar to RNA sequence,
EST:INSD:BP632996.1,INSD:ES087221.1,INSD:DR376543.1,
INSD:ES180840.1,INSD:ES125235.1,INSD:ES146084.1,
INSD:ES058949.1,INSD:ES143024.1,INSD:ES200775.1,
INSD:DR198679.1,INSD:DR232887.1,INSD:AU229666.1,
INSD:EH876227.1,INSD:EL334155.1"
/note="Polynucleotidyl transferase, ribonuclease H-like
superfamily protein; FUNCTIONS IN: ribonuclease H
activity, RNA binding, catalytic activity, nucleic acid
binding; INVOLVED IN: RNA metabolic process; EXPRESSED IN:
22 plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Ribonuclease H2, subunit A
(InterPro:IPR004649), Ribonuclease HII/HIII
(InterPro:IPR001352), Polynucleotidyl transferase,
ribonuclease H fold (InterPro:IPR012337); Has 6305 Blast
hits to 6298 proteins in 2456 species: Archae - 256;
Bacteria - 4469; Metazoa - 152; Fungi - 137; Plants - 56;
Viruses - 3; Other Eukaryotes - 1232 (source: NCBI
BLink)."
/db_xref="Araport:AT2G25100"
/db_xref="TAIR:AT2G25100"
intron_pos 29:1 (1/6)
intron_pos 53:1 (2/6)
intron_pos 94:2 (3/6)
intron_pos 105:0 (4/6)
intron_pos 180:1 (5/6)
intron_pos 220:2 (6/6)
BEGIN
1 MESECLTPEW ASQPCLMGID EAGRGPVLGP MVYGCMYCPI SYQSSLASLH FADSKTLKEE
61 KREELYESLK LDKSLGWAVD VIDPRELSAK MLAKVLDMGV LLTEAYLDTV GDPDKYRIKL
121 SERFPSIKFV VSKKADSLFP IVSGASIVAK VTRDRALKEW LVEETGEDIN RNFGSGYPGD
181 PETKAWLVQH KHSVFGFPSL VRFSWGTCTT HLKGEVEVAW EADENEESGN GSSSKRQAKL
241 SSFGFKTCEK RSEEIESSGK GRCKFLQARK IQQLTQF
//