LOCUS AEC07642.1 411 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana transmembrane protein, putative (
DUF239) protein.
ACCESSION CP002685-3086
PROTEIN_ID AEC07642.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G24950"
/gene_synonym="F27C12.13"
/gene_synonym="F27C12_13"
/inference="Similar to RNA sequence,
EST:INSD:EG424164.1,INSD:EG424130.1,INSD:EG424175.1,
INSD:EG424153.1,INSD:EG424141.1"
/note="Protein of Unknown Function (DUF239); FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; CONTAINS InterPro DOMAIN/s: Protein of unknown
function DUF239, plant (InterPro:IPR004314); BEST
Arabidopsis thaliana protein match is: Protein of Unknown
Function (DUF239) (TAIR:AT4G15050.1); Has 643 Blast hits
to 610 proteins in 23 species: Archae - 0; Bacteria - 11;
Metazoa - 0; Fungi - 0; Plants - 632; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink)."
/db_xref="Araport:AT2G24950"
/db_xref="TAIR:AT2G24950"
intron_pos 73:0 (1/6)
intron_pos 104:0 (2/6)
intron_pos 177:0 (3/6)
intron_pos 229:0 (4/6)
intron_pos 247:0 (5/6)
intron_pos 295:0 (6/6)
BEGIN
1 MEKKKSLYSY IFTLTLFLTN MKMSCWRMLL FLLGYILYFY RFVDAEILQT FSDFEIEEQL
61 KVVNKPATKI IKTIHGDSYD CVDFYKQPAF DHPLMKNHLF HYKMRRPSSL RTSRASNRKF
121 GYLWKNGIGC PIGTVPIKKI AKDELLKLNL FSNSYNPRGS WNFTYNQYNV DNNQHHFAVS
181 RTKKIIGKIY NGATMILSIN DPKVKPLQYS SARMHVQIGD DFIQAGWTVN QKLYSDNKTR
241 SYVYTKIGEN QCYNSMCPAG IIMVSSDIAL GLDLGPPCVR GSRTMVSSEF GLLKNKENGD
301 WWLKLGGQEI GYWPAKKFKE TSANNIEWGG EVYSAFLPSP QMRNDHFPET HIEYDAIIFN
361 ITIVDENFKS VERIKHREAF SDNTRGYKVY DDIYVELPIR NAIYYGGPGN I
//