LOCUS AEC07595.1 196 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana RNA recognition motif and CCHC-type
zinc finger domains containing protein protein.
ACCESSION CP002685-3018
PROTEIN_ID AEC07595.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="RSZ22a"
/locus_tag="AT2G24590"
/gene_synonym="At-RSZ22a"
/gene_synonym="F25P17.11"
/gene_synonym="F25P17_11"
/gene_synonym="RS-containing zinc finger protein 22a"
/inference="Similar to RNA sequence,
EST:INSD:EH847057.1,INSD:ES086776.1,INSD:DR330578.1,
INSD:DR330575.1,INSD:EG516260.1,INSD:BP824340.1,
INSD:ES098843.1,INSD:DR330577.1,INSD:AU238719.1,
INSD:BP636689.1,INSD:EG516259.1,INSD:EH942715.1,
INSD:AV545431.1,INSD:BP814793.1,INSD:ES050652.1,
INSD:DR751270.1,INSD:ES038927.1,INSD:BP826528.1,
INSD:AU229951.1,INSD:BP650364.1,INSD:DR751264.1,
INSD:EL243439.1,INSD:ES059061.1,INSD:DR370447.1,
INSD:ES050448.1,INSD:BP779841.1,INSD:ES094027.1,
INSD:EH927190.1,INSD:ES078583.1,INSD:DR751269.1,
INSD:BP832206.1,INSD:EL114409.1,INSD:DR330574.1"
/inference="similar to RNA sequence,
mRNA:INSD:AK117883.1,INSD:BX821309.1,INSD:BT005216.1"
/note="RNA recognition motif and CCHC-type zinc finger
domains containing protein; FUNCTIONS IN: zinc ion
binding, nucleotide binding, nucleic acid binding;
INVOLVED IN: RNA splicing; LOCATED IN: nucleolus;
EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition
motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding,
alpha-beta plait (InterPro:IPR012677), Zinc finger,
CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana
protein match is: serine/arginine-rich 22
(TAIR:AT4G31580.2); Has 11952 Blast hits to 10510 proteins
in 739 species: Archae - 6; Bacteria - 805; Metazoa -
6109; Fungi - 1395; Plants - 2528; Viruses - 91; Other
Eukaryotes - 1018 (source: NCBI BLink)."
/db_xref="Araport:AT2G24590"
/db_xref="TAIR:AT2G24590"
intron_pos 30:2 (1/4)
intron_pos 60:1 (2/4)
intron_pos 143:2 (3/4)
intron_pos 185:2 (4/4)
BEGIN
1 MSRVYVGNLD PRVTERELED EFRSFGVIRS VWVARRPPGY AFLDFEDSRD ARDAIREVDG
61 KNGWRVEQSH NRGGGGGRGG GRGGGDGGRG RGGSDLKCYE CGESGHFARE CRSRGGSGGR
121 RRSRSRSRSP PRYRKSPTYG GRRSYSPRAR SPPPPRRRSP SPRGRNYSRS PPPYRARDEV
181 PYANGNGLKD VRRSRS
//