LOCUS AEC07524.1 312 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Translation initiation factor 3 protein
protein.
ACCESSION CP002685-2926
PROTEIN_ID AEC07524.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G24060"
/gene_synonym="T29E15.26"
/gene_synonym="T29E15_26"
/inference="Similar to RNA sequence,
EST:INSD:EH835784.1,INSD:EG509552.1,INSD:BE038712.1,
INSD:AI998122.1,INSD:EL230008.1,INSD:EL047496.1,
INSD:DR195255.1,INSD:EH967521.1,INSD:EH933443.1,
INSD:BP795890.1,INSD:EH924668.1,INSD:EL024285.1,
INSD:EH799982.1,INSD:EL115105.1,INSD:BP634788.1,
INSD:EL114462.1,INSD:EH858459.1,INSD:EL015904.1,
INSD:EH916046.1,INSD:AV817356.1,INSD:EH843486.1,
INSD:ES187928.1,INSD:N96477.1,INSD:EL021508.1,
INSD:EL008630.1,INSD:EL086631.1,INSD:BP662610.1,
INSD:EL159221.1,INSD:EL073708.1,INSD:EH978698.1,
INSD:EL003240.1,INSD:EL214723.1,INSD:BP634735.1,
INSD:EH984406.1,INSD:EH941613.1,INSD:EL231421.1,
INSD:EL193020.1,INSD:EL317632.1,INSD:AI992494.1,
INSD:EL968408.1,INSD:DR376870.1,INSD:EL978208.1,
INSD:EH940532.1,INSD:EL021380.1,INSD:EL243687.1,
INSD:ES036986.1,INSD:EG509555.1,INSD:ES188241.1,
INSD:DR195254.1,INSD:CB263126.1,INSD:EL015958.1,
INSD:ES002839.1,INSD:F14277.1,INSD:EL000610.1,
INSD:EH872529.1,INSD:EL968352.1,INSD:EH891610.1,
INSD:EL296042.1,INSD:DR195256.1,INSD:EL152250.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY088131.1,INSD:BX820685.1,INSD:AY096414.1,
INSD:AY072160.1"
/note="Translation initiation factor 3 protein; FUNCTIONS
IN: translation initiation factor activity; INVOLVED IN:
translational initiation; LOCATED IN: chloroplast;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Translation
initiation factor 3, N-terminal (InterPro:IPR019814),
Translation initiation factor 3, conserved site
(InterPro:IPR019813), Translation initiation factor 3,
C-terminal (InterPro:IPR019815), Translation initiation
factor 3 (InterPro:IPR001288); BEST Arabidopsis thaliana
protein match is: Translation initiation factor 3 protein
(TAIR:AT4G30690.1); Has 20358 Blast hits to 11134 proteins
in 2694 species: Archae - 56; Bacteria - 8982; Metazoa -
2020; Fungi - 711; Plants - 802; Viruses - 337; Other
Eukaryotes - 7450 (source: NCBI BLink)."
/db_xref="Araport:AT2G24060"
/db_xref="TAIR:AT2G24060"
intron_pos 96:2 (1/8)
intron_pos 110:0 (2/8)
intron_pos 130:0 (3/8)
intron_pos 147:2 (4/8)
intron_pos 164:1 (5/8)
intron_pos 175:2 (6/8)
intron_pos 200:0 (7/8)
intron_pos 231:0 (8/8)
BEGIN
1 MAGITSSTVG FNAVFTGITK TVSSHSLFSV DSKLCSLRLS KTELSFTNLT PSPRRAFAVT
61 CRFGGGGGGY RFSGDNRRGR PKEAEIDEAL DISSIRSATV RLIDGQQNML GLVSKDEAVR
121 MADDAELDLV ILSPDADPPV VKMMDYSKYR YEQQKRKKDQ QKKTTRMDLK ELKMGYNIDQ
181 HDYSVRLRAA QKFLQDGDKV KVIVSMKGRE NEFRNIAIEL LRRFQTEIGE LATEESKNFR
241 DRNMFIILVP NKEMIRKPQE PPTRKKKKTA ENEASASAAE ITAEPEPEPE PEPEPEPEPE
301 PEPEPEPLQI DS
//