LOCUS AEC07498.1 284 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana HNH endonuclease protein.
ACCESSION CP002685-2854
PROTEIN_ID AEC07498.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G23840"
/gene_synonym="T29E15.4"
/gene_synonym="T29E15_4"
/inference="Similar to RNA sequence,
EST:INSD:AV521815.1,INSD:EL092962.1,INSD:BU636214.1,
INSD:EH907904.1,INSD:EH962054.1,INSD:AV564010.1,
INSD:DR369103.1,INSD:EH976518.1,INSD:EL214834.1,
INSD:EH868566.1,INSD:AV535369.1"
/inference="similar to RNA sequence,
mRNA:INSD:BT010946.1,INSD:BT011660.1"
/note="HNH endonuclease; FUNCTIONS IN: endonuclease
activity, nucleic acid binding; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HNH
nuclease (InterPro:IPR003615), HNH endonuclease
(InterPro:IPR002711); Has 4176 Blast hits to 4176 proteins
in 656 species: Archae - 6; Bacteria - 1679; Metazoa - 0;
Fungi - 0; Plants - 37; Viruses - 29; Other Eukaryotes -
2425 (source: NCBI BLink)."
/db_xref="Araport:AT2G23840"
/db_xref="TAIR:AT2G23840"
intron_pos 114:2 (1/6)
intron_pos 133:0 (2/6)
intron_pos 158:0 (3/6)
intron_pos 188:2 (4/6)
intron_pos 216:0 (5/6)
intron_pos 244:0 (6/6)
BEGIN
1 MAHFSARLKL LSSNDGLSFG VDSRDQFRQS LYMAGGGSPL VPIRMSRLKF CARIFSSYSF
61 PYKRKKIRDL DNTEKNLDID EDNDEWDFDG DDDGLETDDH LSCFRGLVLD ISYRPVNVVC
121 WKRAICLEYM DKADVLEYYD QTVSSPTGSF YIPAVLRVPH LLQVVKRRRV KNSLSRKNIL
181 LRDDYTCQYC SSRENLTIDH VMPVSRGGEW TWQNLVAACS RCNSRKGQKT ADEAHMKLLK
241 VPKEPKDYDI VAIPLTNAAI RMLRSNKGMP EEWRQYLAKP LSET
//