LOCUS AEC07479.1 189 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Cold acclimation protein WCOR413
family protein.
ACCESSION CP002685-2828
PROTEIN_ID AEC07479.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G23680"
/gene_synonym="F26B6.33"
/inference="Similar to RNA sequence,
EST:INSD:BP577194.1,INSD:AV789122.1,INSD:AV824982.1,
INSD:EL304897.1,INSD:DR286394.1,INSD:EG500612.1,
INSD:EH970017.1,INSD:DR381986.1"
/inference="similar to RNA sequence, mRNA:INSD:AY063884.1"
/note="Cold acclimation protein WCOR413 family; FUNCTIONS
IN: molecular_function unknown; INVOLVED IN: response to
stress; LOCATED IN: membrane; EXPRESSED IN: 6 plant
structures; EXPRESSED DURING: LP.06 six leaves visible,
LP.04 four leaves visible, 4 anthesis, LP.10 ten leaves
visible, LP.08 eight leaves visible; CONTAINS InterPro
DOMAIN/s: Cold acclimation WCOR413 (InterPro:IPR008892);
BEST Arabidopsis thaliana protein match is: Cold
acclimation protein WCOR413 family (TAIR:AT4G37220.1); Has
150 Blast hits to 147 proteins in 29 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 150;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink)."
/db_xref="Araport:AT2G23680"
/db_xref="TAIR:AT2G23680"
intron_pos 40:2 (1/3)
intron_pos 78:2 (2/3)
intron_pos 102:1 (3/3)
BEGIN
1 MENIEYLNEI QAVAGKLIHS YGVPVMITLF LRWLASIVAV FLMILDQTKW KYSNNIMASL
61 LAPYLFSSLP IVIFQVLRNG VGKWIALLTV ILRLFLPNHF HESLEIPGAT ILLIVVTPSD
121 IGAIFRDDLR YTGGDVCLLT SFYLINKHTK ACGGIKNSFT QKDKVTYSIC LWILFVYPIL
181 SSFAALFYL
//