LOCUS AEC07418.1 826 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana RING/U-box superfamily protein with
ARM repeat domain-containing protein protein.
ACCESSION CP002685-2750
PROTEIN_ID AEC07418.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="PUB4"
/locus_tag="AT2G23140"
/gene_synonym="AtPUB4"
/gene_synonym="plant U-box 4"
/gene_synonym="T20D16.23"
/gene_synonym="T20D16_23"
/note="RING/U-box superfamily protein with ARM repeat
domain; FUNCTIONS IN: ubiquitin-protein ligase activity,
binding; INVOLVED IN: protein ubiquitination; LOCATED IN:
ubiquitin ligase complex; EXPRESSED IN: male gametophyte,
pollen tube; EXPRESSED DURING: L mature pollen stage, M
germinated pollen stage; CONTAINS InterPro DOMAIN/s: U box
domain (InterPro:IPR003613), Armadillo-like helical
(InterPro:IPR011989), Armadillo (InterPro:IPR000225),
Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis
thaliana protein match is: ARM repeat superfamily protein
(TAIR:AT5G67340.1)."
/db_xref="Araport:AT2G23140"
/db_xref="TAIR:AT2G23140"
intron_pos 88:0 (1/3)
intron_pos 127:0 (2/3)
intron_pos 808:0 (3/3)
BEGIN
1 MEVLLRSISS FLNLSSSKHI DLDPFEKYYK RVEELLRVLK PIADVVVTSD FVFDEKLGKA
61 FEELTQDVDQ SIDLFRSWQA FSSKVYFVLQ IESLLPKMRD TIVDTFQFLM SSKNHLPDEL
121 SPASLEQCLE KIKHLSYEEI SSVIDGALRD QRDGVGPSPE ILVKIGENTG LRSNQEILIE
181 AVALERQKEM AEQSENNAEV EFLDQLIVIV NRMHERLLLI KQTQTSSVAI LADFFCPLSL
241 EVMTDPVIVS SGQTYEKAFI KRWIDLGLKV CPKTRQTLTH TTLIPNYTVK ALIANWCETN
301 DVKLPDPNKS TSLNELSPLL SCTDSIPSTG ADVSARKVSN KSHDWDASSS ETGKPSFSSR
361 ATEREGASPS RPASALGASS PGISGNGYGL DARRGSLNDF EDRSNDSREL RTDAPGRSSV
421 SSTTRGSVEN GQTSENHHHR SPSATSTVSN EEFPRADANE NSEESAHATP YSSDASGEIR
481 SGPLAATTSA ATRRDLSDFS PKFMDRRTRG QFWRRPSERL GSRIVSAPSN ETRRDLSEVE
541 TQVKKLVEEL KSSSLDTQRQ ATAELRLLAK HNMDNRIVIG NSGAIVLLVE LLYSTDSATQ
601 ENAVTALLNL SINDNNKKAI ADAGAIEPLI HVLENGSSEA KENSAATLFS LSVIEENKIK
661 IGQSGAIGPL VDLLGNGTPR GKKDAATALF NLSIHQENKA MIVQSGAVRY LIDLMDPAAG
721 MVDKAVAVLA NLATIPEGRN AIGQEGGIPL LVEVVELGSA RGKENAAAAL LQLSTNSGRF
781 CNMVLQEGAV PPLVALSQSG TPRAREKAQA LLSYFRNQRH GNAGRG
//