LOCUS       AEC07417.1               829 aa    PRT              PLN 23-MAR-2023
DEFINITION  Arabidopsis thaliana RING/U-box superfamily protein with
            ARM repeat domain-containing protein protein.
ACCESSION   CP002685-2748
PROTEIN_ID  AEC07417.1
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 19698289)
  AUTHORS   Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
            Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
            Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
            Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
            Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
            Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
            Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
            Venter,J.C.
  TITLE     Sequence and analysis of chromosome 2 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 402 (6763), 761-768 (1999)
   PUBMED   10617197
REFERENCE   2  (bases 1 to 19698289)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE   3  (bases 1 to 19698289)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
FEATURES             Qualifiers
     source          /organism="Arabidopsis thaliana"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:3702"
                     /chromosome="2"
                     /ecotype="Columbia"
     protein         /gene="PUB4"
                     /locus_tag="AT2G23140"
                     /gene_synonym="AtPUB4"
                     /gene_synonym="plant U-box 4"
                     /gene_synonym="T20D16.23"
                     /gene_synonym="T20D16_23"
                     /inference="Similar to RNA sequence,
                     EST:INSD:BE523996.1,INSD:EL209615.1,INSD:EG520202.1,
                     INSD:EL097682.1,INSD:EG520201.1,INSD:EH912227.1,
                     INSD:ES092038.1,INSD:ES125415.1,INSD:ES199752.1,
                     INSD:EL238041.1,INSD:EL253136.1,INSD:EL323555.1,
                     INSD:ES014790.1,INSD:ES130215.1,INSD:AV556642.1,
                     INSD:EL315146.1,INSD:EH902864.1"
                     /note="RING/U-box superfamily protein with ARM repeat
                     domain; FUNCTIONS IN: ubiquitin-protein ligase activity,
                     binding; INVOLVED IN: protein ubiquitination; LOCATED IN:
                     ubiquitin ligase complex; EXPRESSED IN: male gametophyte,
                     cultured cell, pollen tube; EXPRESSED DURING: L mature
                     pollen stage, M germinated pollen stage; CONTAINS InterPro
                     DOMAIN/s: U box domain (InterPro:IPR003613),
                     Armadillo-like helical (InterPro:IPR011989), Armadillo
                     (InterPro:IPR000225), Armadillo-type fold
                     (InterPro:IPR016024); BEST Arabidopsis thaliana protein
                     match is: ARM repeat superfamily protein
                     (TAIR:AT5G67340.1); Has 11466 Blast hits to 5570 proteins
                     in 449 species: Archae - 8; Bacteria - 346; Metazoa -
                     2626; Fungi - 852; Plants - 4850; Viruses - 10; Other
                     Eukaryotes - 2774 (source: NCBI BLink)."
                     /db_xref="Araport:AT2G23140"
                     /db_xref="TAIR:AT2G23140"
     intron_pos      1:2 (1/4)
     intron_pos      91:0 (2/4)
     intron_pos      130:0 (3/4)
     intron_pos      811:0 (4/4)
BEGIN
        1 MVEMEVLLRS ISSFLNLSSS KHIDLDPFEK YYKRVEELLR VLKPIADVVV TSDFVFDEKL
       61 GKAFEELTQD VDQSIDLFRS WQAFSSKVYF VLQIESLLPK MRDTIVDTFQ FLMSSKNHLP
      121 DELSPASLEQ CLEKIKHLSY EEISSVIDGA LRDQRDGVGP SPEILVKIGE NTGLRSNQEI
      181 LIEAVALERQ KEMAEQSENN AEVEFLDQLI VIVNRMHERL LLIKQTQTSS VAILADFFCP
      241 LSLEVMTDPV IVSSGQTYEK AFIKRWIDLG LKVCPKTRQT LTHTTLIPNY TVKALIANWC
      301 ETNDVKLPDP NKSTSLNELS PLLSCTDSIP STGADVSARK VSNKSHDWDA SSSETGKPSF
      361 SSRATEREGA SPSRPASALG ASSPGISGNG YGLDARRGSL NDFEDRSNDS RELRTDAPGR
      421 SSVSSTTRGS VENGQTSENH HHRSPSATST VSNEEFPRAD ANENSEESAH ATPYSSDASG
      481 EIRSGPLAAT TSAATRRDLS DFSPKFMDRR TRGQFWRRPS ERLGSRIVSA PSNETRRDLS
      541 EVETQVKKLV EELKSSSLDT QRQATAELRL LAKHNMDNRI VIGNSGAIVL LVELLYSTDS
      601 ATQENAVTAL LNLSINDNNK KAIADAGAIE PLIHVLENGS SEAKENSAAT LFSLSVIEEN
      661 KIKIGQSGAI GPLVDLLGNG TPRGKKDAAT ALFNLSIHQE NKAMIVQSGA VRYLIDLMDP
      721 AAGMVDKAVA VLANLATIPE GRNAIGQEGG IPLLVEVVEL GSARGKENAA AALLQLSTNS
      781 GRFCNMVLQE GAVPPLVALS QSGTPRAREK AQALLSYFRN QRHGNAGRG
//