LOCUS AEC07400.1 481 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Phototropic-responsive NPH3 family
protein protein.
ACCESSION CP002685-2729
PROTEIN_ID AEC07400.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="NPY4"
/locus_tag="AT2G23050"
/gene_synonym="F21P24.11"
/gene_synonym="F21P24_11"
/gene_synonym="MAB4/ENP/NPY1-LIKE 4"
/gene_synonym="MEL4"
/gene_synonym="NAKED PINS IN YUC MUTANTS 4"
/inference="Similar to RNA sequence,
EST:INSD:EG442297.1,INSD:EG442288.1,INSD:EG442302.1,
INSD:EG442283.1,INSD:EG442291.1,INSD:EG442284.1,
INSD:EG442285.1,INSD:AU229497.1,INSD:EG442294.1,
INSD:EG442300.1,INSD:EG442299.1,INSD:EG442290.1,
INSD:EG442303.1,INSD:EL229048.1,INSD:AU238329.1,
INSD:EG442301.1,INSD:EG442295.1,INSD:EG442304.1,
INSD:EG442286.1,INSD:DR357295.1,INSD:DR357297.1,
INSD:EG442282.1,INSD:DR357296.1,INSD:DR357298.1,
INSD:DR382735.1,INSD:EG442296.1,INSD:EG442289.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY954795.1,INSD:BT005613.1,INSD:AK117486.1,
INSD:AY102541.1"
/note="NAKED PINS IN YUC MUTANTS 4 (NPY4); FUNCTIONS IN:
signal transducer activity; INVOLVED IN: response to light
stimulus; EXPRESSED IN: 6 plant structures; EXPRESSED
DURING: D bilateral stage; CONTAINS InterPro DOMAIN/s:
NPH3 (InterPro:IPR004249), BTB/POZ (InterPro:IPR013069),
BTB/POZ fold (InterPro:IPR011333), BTB/POZ-like
(InterPro:IPR000210); BEST Arabidopsis thaliana protein
match is: Phototropic-responsive NPH3 family protein
(TAIR:AT4G37590.1); Has 915 Blast hits to 887 proteins in
39 species: Archae - 0; Bacteria - 0; Metazoa - 38; Fungi
- 0; Plants - 873; Viruses - 0; Other Eukaryotes - 4
(source: NCBI BLink)."
/db_xref="Araport:AT2G23050"
/db_xref="TAIR:AT2G23050"
intron_pos 21:2 (1/3)
intron_pos 45:0 (2/3)
intron_pos 400:0 (3/3)
BEGIN
1 MKFMKLGTKP DSFLSKGDNV RYVTNELETE IIIIIGNVKF YLHKFPLLSK SGFLQKHIAT
61 SKNEEEKKNQ IDEIDISEIP GGSVAFEICV KFCYGITVTL NAYNVVAVRC AAEFLEMNET
121 FEKSNLVYKI DVFLNSTIFR SWKDSIIVLQ TTKDLLSDDS EELVKRCLGS IASTASIDTS
181 KVKWSYTYNR KKKLEKVRKP EDGVPKDWWV EDLCELHIDL YKQAIKAIKN RGKVPSNVIG
241 EALHAYAIRR IAGFSKESMQ LIDRSLINTI IELLPDEKGN ISSSFLTKLH RASIFLGCEE
301 TVKEKLKKRV SEQLEETTVN DILMYDLDMV QSLVKEFMNR DPKTHSKVSV AKLIDGYLAE
361 KSRDPNLPLQ NFLSLAETLS SFPRHSHDVL YRAIDMFLKE HSGISKSEKK RVCGLMDCRK
421 LSAEACEHAV QNERLPMRVI VQVLFFEQIR ANGSSTGYST PELTTTTLNT EDDEWDHEKE
481 F
//