LOCUS AEC07352.1 320 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana basic helix-loop-helix (bHLH) DNA-
binding superfamily protein protein.
ACCESSION CP002685-2675
PROTEIN_ID AEC07352.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="NAI1"
/locus_tag="AT2G22770"
/gene_synonym="T30L20.3"
/gene_synonym="T30L20_3"
/inference="Similar to RNA sequence,
EST:INSD:EG456578.1,INSD:EL286243.1,INSD:EH882156.1,
INSD:EH937102.1,INSD:EH911674.1,INSD:EL180827.1,
INSD:EG456579.1,INSD:DR749592.1,INSD:BP800202.1,
INSD:EL239728.1,INSD:DR749593.1,INSD:EL063207.1,
INSD:EL112617.1,INSD:EH877533.1,INSD:EL315242.1,
INSD:AV521081.1,INSD:AV527715.1"
/inference="similar to RNA sequence,
mRNA:INSD:AK176248.1,INSD:AF488564.1"
/note="NAI1; FUNCTIONS IN: DNA binding, sequence-specific
DNA binding transcription factor activity; INVOLVED IN:
regulation of transcription; LOCATED IN: nucleus;
EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4
anthesis; CONTAINS InterPro DOMAIN/s: Helix-loop-helix
DNA-binding domain (InterPro:IPR001092), Helix-loop-helix
DNA-binding (InterPro:IPR011598); BEST Arabidopsis
thaliana protein match is: basic helix-loop-helix (bHLH)
DNA-binding superfamily protein (TAIR:AT2G22760.1); Has
3457 Blast hits to 3451 proteins in 191 species: Archae -
0; Bacteria - 0; Metazoa - 118; Fungi - 69; Plants - 3252;
Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink)."
/db_xref="Araport:AT2G22770"
/db_xref="TAIR:AT2G22770"
intron_pos 161:0 (1/2)
intron_pos 299:0 (2/2)
BEGIN
1 MDDSSFMDLM IDTDEYLIDD WESDFPICGE TNTNPGSESG SGTGFELLAE RPTKQMKTNN
61 NMNSTSSSPS SSSSSGSRTS QVISFGSPDT KTNPVETSLN FSNQVSMDQK VGSKRKDCVN
121 NGGRREPHLL KEHVLAERKR RQKLNERLIA LSALLPGLKK TDKATVLEDA IKHLKQLQER
181 VKKLEEERVV TKKMDQSIIL VKRSQVYLDD DSSSYSSTCS AASPLSSSSD EVSIFKQTMP
241 MIEARVSDRD LLIRVHCEKN KGCMIKILSS LEKFRLEVVN SFTLPFGNST LVITILTKMD
301 NKFSRPVEEV VKNIRVALAE
//