LOCUS AEC07348.1 790 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana SU(VAR)3-9 homolog 6 protein.
ACCESSION CP002685-2667
PROTEIN_ID AEC07348.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="SUVH6"
/locus_tag="AT2G22740"
/gene_synonym="SDG23"
/gene_synonym="SET DOMAIN PROTEIN 23"
/gene_synonym="SU(VAR)3-9 homolog 6"
/gene_synonym="T9I22.18"
/gene_synonym="T9I22_18"
/inference="Similar to RNA sequence,
EST:INSD:ES118068.1,INSD:ES215570.1,INSD:DR354167.1,
INSD:AV824509.1,INSD:BX840192.1,INSD:ES099881.1,
INSD:AV786441.1,INSD:BX836144.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY065374.1,INSD:BT002751.1"
/note="SU(VAR)3-9 homolog 6 (SUVH6); FUNCTIONS IN:
methyl-CpNpG binding, methyltransferase activity,
methyl-CpG binding, methyl-CpNpN binding; INVOLVED IN:
histone methylation; LOCATED IN: nucleus; EXPRESSED IN: 24
plant structures; EXPRESSED DURING: 15 growth stages;
CONTAINS InterPro DOMAIN/s: SET domain
(InterPro:IPR001214), SRA-YDG (InterPro:IPR003105),
Pre-SET zinc-binding sub-group (InterPro:IPR003606),
Pre-SET domain (InterPro:IPR007728), Post-SET domain
(InterPro:IPR003616); BEST Arabidopsis thaliana protein
match is: SU(VAR)3-9 homolog 5 (TAIR:AT2G35160.1); Has
4885 Blast hits to 4696 proteins in 447 species: Archae -
0; Bacteria - 363; Metazoa - 2323; Fungi - 494; Plants -
1133; Viruses - 0; Other Eukaryotes - 572 (source: NCBI
BLink)."
/db_xref="Araport:AT2G22740"
/db_xref="TAIR:AT2G22740"
BEGIN
1 MEMGVMENLM VHTEISKVKS QSNGEVEKRG VSVLENGGVC KLDRMSGLKF KRRKVFAVRD
61 FPPGCGSRAM EVKIACENGN VVEDVKVVES LVKEEESLGQ RDASENVSDI RMAEPVEVQP
121 LRICLPGGDV VRDLSVTAGD ECSNSEQIVA GSGVSSSSGT ENIVRDIVVY ADESSLGMDN
181 LDQTQPLEIE MSDVAVAKPR LVAGRKKAKK GIACHSSLKV VSREFGEGSR KKKSKKNLYW
241 RDRESLDSPE QLRILGVGTS SGSSSGDSSR NKVKETLRLF HGVCRKILQE DEAKPEDQRR
301 KGKGLRIDFE ASTILKRNGK FLNSGVHILG EVPGVEVGDE FQYRMELNIL GIHKPSQAGI
361 DYMKYGKAKV ATSIVASGGY DDHLDNSDVL TYTGQGGNVM QVKKKGEELK EPEDQKLITG
421 NLALATSIEK QTPVRVIRGK HKSTHDKSKG GNYVYDGLYL VEKYWQQVGS HGMNVFKFQL
481 RRIPGQPELS WVEVKKSKSK YREGLCKLDI SEGKEQSPIS AVNEIDDEKP PLFTYTVKLI
541 YPDWCRPVPP KSCCCTTRCT EAEARVCACV EKNGGEIPYN FDGAIVGAKP TIYECGPLCK
601 CPSSCYLRVT QHGIKLPLEI FKTKSRGWGV RCLKSIPIGS FICEYVGELL EDSEAERRIG
661 NDEYLFDIGN RYDNSLAQGM SELMLGTQAG RSMAEGDESS GFTIDAASKG NVGRFINHSC
721 SPNLYAQNVL YDHEDSRIPH VMFFAQDNIP PLQELCYDYN YALDQVRDSK GNIKQKPCFC
781 GAAVCRRRLY
//