LOCUS AEC07345.1 569 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana SPT2 chromatin protein protein.
ACCESSION CP002685-2655
PROTEIN_ID AEC07345.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G22720"
/gene_synonym="T9I22.16"
/gene_synonym="T9I22_16"
/inference="Similar to RNA sequence,
EST:INSD:BP779747.1,INSD:ES120484.1,INSD:DR262601.1,
INSD:EL117631.1,INSD:BP789354.1,INSD:AV788956.1,
INSD:EG440492.1,INSD:DR365153.1,INSD:AV810255.1,
INSD:BP789443.1,INSD:AI994873.1,INSD:BP869037.1,
INSD:EL170555.1,INSD:EL173489.1,INSD:ES048681.1,
INSD:BP630017.1,INSD:ES056854.1,INSD:AV806406.1,
INSD:BE529232.1,INSD:N97072.1,INSD:BP807212.1,
INSD:W43621.1,INSD:EG427230.1,INSD:BP637613.1,
INSD:BP644887.1,INSD:BP644878.1,INSD:EG441882.1,
INSD:EL034986.1,INSD:AV824957.1,INSD:DR262602.1,
INSD:BP794539.1,INSD:ES164149.1,INSD:BP808029.1,
INSD:BP863250.1,INSD:ES049154.1,INSD:AV549651.1,
INSD:BP791797.1,INSD:EL210647.1,INSD:AV537667.1,
INSD:BP562081.2"
/inference="similar to RNA sequence,
mRNA:INSD:BT000561.1,INSD:AK226502.1"
/note="SPT2 chromatin protein; CONTAINS InterPro DOMAIN/s:
Chromatin SPT2 (InterPro:IPR013256); BEST Arabidopsis
thaliana protein match is: SPT2 chromatin protein
(TAIR:AT4G37860.1); Has 35333 Blast hits to 34131 proteins
in 2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink)."
/db_xref="Araport:AT2G22720"
/db_xref="TAIR:AT2G22720"
intron_pos 7:0 (1/7)
intron_pos 78:2 (2/7)
intron_pos 116:0 (3/7)
intron_pos 183:1 (4/7)
intron_pos 466:0 (5/7)
intron_pos 508:2 (6/7)
intron_pos 537:2 (7/7)
BEGIN
1 MHGYEDDLDE EAGYDDYYSG DEDEYEDEEE EDEEPPKEEL EFLESRQKLK ESIRKKMGNG
61 SANAQSSQER RRKLPYNDFG SFFGPSRPVI SSRVIQESKS LLENELRKMS NSSQTKKRPV
121 PTNGSGSKNV SQEKRPKVVN EVRRKVETLK DTRDYSFLFS DDAELPVPKK ESLSRSGSFP
181 NSEARSAQLS SRPKQSSGIN GRTAHSPHRE EKRPVSANGH SRPSSSGSQM NHSRPSSSGS
241 KMNHSRPATS GSQMPNSRPA SSGSQMQSRA VSGSGRPASS GSQMQNSRPQ NSRPASAGSQ
301 MQQRPASSGS QRPASSGSQR PASSGSQRPG SSTNRQAPMR PPGSGSTMNG QSANRNGQLN
361 SRSDSRRSAP AKVPVDHRKQ MSSSNGVGPG RSATNARPLP SKSSLERKPS ISAGKSSLQS
421 PQRPSSSRPM SSDPRQRVVE QRKVSRDMAT PRMIPKQSAP TSKHQMMSKP ALKRPPSRDI
481 DHERRLLKKK KPARSEDQEA FDMLRQLLPP KRFSRYDDDD INMEAGFEDI QKEERRSARI
541 AREEDERELK LLEEEERRER LKKNRKLSR
//