LOCUS AEC07344.1 340 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana SPT2 chromatin protein protein.
ACCESSION CP002685-2658
PROTEIN_ID AEC07344.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G22720"
/gene_synonym="T9I22.16"
/gene_synonym="T9I22_16"
/inference="Similar to RNA sequence,
EST:INSD:BP779747.1,INSD:ES120484.1,INSD:EL117631.1,
INSD:BP789354.1,INSD:AV788956.1,INSD:EG440492.1,
INSD:DR365153.1,INSD:AV810255.1,INSD:DR364191.1,
INSD:BP789443.1,INSD:AI994873.1,INSD:EL170555.1,
INSD:EL173489.1,INSD:ES048681.1,INSD:BP630017.1,
INSD:ES056854.1,INSD:AV806406.1,INSD:BE529232.1,
INSD:N97072.1,INSD:W43621.1,INSD:EG427230.1,
INSD:BP637613.1,INSD:BP644887.1,INSD:BP644878.1,
INSD:BP807542.1,INSD:EG441882.1,INSD:EL034986.1,
INSD:BP794539.1,INSD:ES164149.1,INSD:ES049154.1,
INSD:AV549651.1,INSD:BP791797.1,INSD:EL210647.1,
INSD:AV537667.1,INSD:BP562081.2"
/inference="similar to RNA sequence,
mRNA:INSD:BT000561.1,INSD:AY057629.1"
/note="SPT2 chromatin protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15
growth stages; CONTAINS InterPro DOMAIN/s: Chromatin SPT2
(InterPro:IPR013256); BEST Arabidopsis thaliana protein
match is: SPT2 chromatin protein (TAIR:AT4G37860.1); Has
20732 Blast hits to 11501 proteins in 824 species: Archae
- 15; Bacteria - 2039; Metazoa - 8268; Fungi - 3444;
Plants - 709; Viruses - 228; Other Eukaryotes - 6029
(source: NCBI BLink)."
/db_xref="Araport:AT2G22720"
/db_xref="TAIR:AT2G22720"
intron_pos 237:0 (1/3)
intron_pos 279:2 (2/3)
intron_pos 308:2 (3/3)
BEGIN
1 MNHSRPSSSG SKMNHSRPAT SGSQMPNSRP ASSGSQMQSR AVSGSGRPAS SGSQMQNSRP
61 QNSRPASAGS QMQQRPASSG SQRPASSGSQ RPASSGSQRP GSSTNRQAPM RPPGSGSTMN
121 GQSANRNGQL NSRSDSRRSA PAKVPVDHRK QMSSSNGVGP GRSATNARPL PSKSSLERKP
181 SISAGKSSLQ SPQRPSSSRP MSSDPRQRVV EQRKVSRDMA TPRMIPKQSA PTSKHQMMSK
241 PALKRPPSRD IDHERRLLKK KKPARSEDQE AFDMLRQLLP PKRFSRYDDD DINMEAGFED
301 IQKEERRSAR IAREEDEREL KLLEEEERRE RLKKNRKLSR
//