LOCUS AEC07326.1 632 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana RNA-binding KH domain-containing
protein protein.
ACCESSION CP002685-2627
PROTEIN_ID AEC07326.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G22600"
/gene_synonym="T9I22.4"
/gene_synonym="T9I22_4"
/note="RNA-binding KH domain-containing protein; FUNCTIONS
IN: RNA binding, nucleic acid binding; INVOLVED IN:
biological_process unknown; EXPRESSED IN: 10 plant
structures; EXPRESSED DURING: 8 growth stages; CONTAINS
InterPro DOMAIN/s: K Homology (InterPro:IPR004087), K
Homology, type 1, subgroup (InterPro:IPR018111), K
Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis
thaliana protein match is: RNA-binding KH
domain-containing protein (TAIR:AT1G51580.1); Has 2093
Blast hits to 1434 proteins in 142 species: Archae - 0;
Bacteria - 0; Metazoa - 1296; Fungi - 118; Plants - 634;
Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink)."
/db_xref="Araport:AT2G22600"
/db_xref="TAIR:AT2G22600"
intron_pos 191:0 (1/6)
intron_pos 331:0 (2/6)
intron_pos 420:0 (3/6)
intron_pos 477:0 (4/6)
intron_pos 555:2 (5/6)
intron_pos 592:0 (6/6)
BEGIN
1 MNNRRGVTTA VSKRRPVIHV LPDETAIRVV CHASVIGGII GSNGYVVSKL RRETGTKIHC
61 ESPVNGSDHW VVFIVGSTAV NQSILLTDRV GEFSGGEHED WVTCEVSAAQ TALIRVLERS
121 WVVLAAKDGG GVVDGEDEEA YCGILADRNQ IGAVLGLGGK NVEWMRRNSG AMIRVLPPPI
181 CGTKNDELIQ ITGDVLAVKK ALVMVSSYIQ NNAPLNGYPP PLSIKGYESL STDGNSEDPH
241 SEFFPNLRSS SLSNATEIVA SNRHLPYDGG NSTERKVVFK IIFTSVVAGG IIGKQGTIIR
301 ALQNETGASI SVGAPLKVSG ERVVTVSARE NLESRYSHAQ NALALVFARS VEIDVEKGLR
361 PGLHNGAIVK TKLLVPSHFA NSFNGNGNRE AIIATGADVH ISVGNQVLEW ISENEVVIEI
421 KGEYSHVQKA LTHVSSKLRE NLLPKKVLGE MRARVSNPYE SAGGRSQIYN LQPSQQDASR
481 GDSLSVSAAV PDLKMVRSGA EVLKSNSVMH TEVLKEVDEL NDFTLPQSLL EEDLTQGMKQ
541 LQMSSNGDVS SLPPRSKGVS VRKITLELAV EKDALGSLYG RDGTGVDNLQ QISGANVDVK
601 DPTGTEATVL ISGNPEQART AMSLIESILT DQ
//