LOCUS AEC07321.1 235 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana K-box region and MADS-box transcription
factor family protein protein.
ACCESSION CP002685-2622
PROTEIN_ID AEC07321.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="SVP"
/locus_tag="AT2G22540"
/gene_synonym="AGAMOUS-like 22"
/gene_synonym="AGL22"
/gene_synonym="AT2G22550"
/gene_synonym="F14M13.6"
/gene_synonym="F14M13_6"
/gene_synonym="FAQ1"
/gene_synonym="Flowering Arabidopsis QTL1"
/gene_synonym="SHORT VEGETATIVE PHASE"
/inference="Similar to RNA sequence,
EST:INSD:EL185825.1,INSD:EH939800.1,INSD:EH975398.1,
INSD:AV825392.1,INSD:EL272195.1,INSD:EL052104.1,
INSD:EL070005.1,INSD:EL256762.1,INSD:BP663278.1,
INSD:ES121865.1,INSD:EL329847.1,INSD:EL216337.1,
INSD:BP628814.1,INSD:EL024673.1,INSD:EL202049.1,
INSD:EG521218.1,INSD:R65130.1,INSD:EL155121.1,
INSD:AV791166.1,INSD:EL077864.1,INSD:EH904274.1,
INSD:BP863489.1,INSD:EL174466.1,INSD:EH819575.1,
INSD:BP667437.1,INSD:ES002633.1,INSD:BP778373.1,
INSD:EL155396.1,INSD:AA651124.1,INSD:EH933854.1,
INSD:EG503086.1,INSD:EL339816.1,INSD:ES061969.1,
INSD:EG521219.1,INSD:BP582413.1,INSD:EL050956.1,
INSD:EL113328.1,INSD:N38367.1,INSD:BP664233.1,
INSD:EH870545.1,INSD:EH961652.1,INSD:EL020298.1,
INSD:EL172457.1"
/inference="similar to RNA sequence, mRNA:INSD:EU078686.1"
/note="SHORT VEGETATIVE PHASE (SVP); CONTAINS InterPro
DOMAIN/s: Transcription factor, MADS-box
(InterPro:IPR002100), Transcription factor, K-box
(InterPro:IPR002487); BEST Arabidopsis thaliana protein
match is: AGAMOUS-like 24 (TAIR:AT4G24540.1); Has 7281
Blast hits to 7260 proteins in 901 species: Archae - 3;
Bacteria - 13; Metazoa - 824; Fungi - 296; Plants - 6010;
Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink)."
/db_xref="Araport:AT2G22540"
/db_xref="TAIR:AT2G22540"
intron_pos 56:2 (1/8)
intron_pos 83:0 (2/8)
intron_pos 104:2 (3/8)
intron_pos 138:0 (4/8)
intron_pos 152:0 (5/8)
intron_pos 166:0 (6/8)
intron_pos 180:0 (7/8)
intron_pos 230:2 (8/8)
BEGIN
1 MAREKIQIRK IDNATARQVT FSKRRRGLFK KAEELSVLCD ADVALIIFSS TGKLFDMKEV
61 LERHNLQSKN LEKLDQPSLE LQLVENSDHA RMSKEIADKS HRLRQMRGEE LQGLDIEELQ
121 QLEKALETGL TRVIETKSDK IMSEISELQK KGMQLMDENK RLRQQGTQLT EENERLGMQI
181 CNNVHAHGGA ESENAAVYEE GQSSESITNA GNSTGAPVDS ESSDTSLRLG LPYGG
//