LOCUS AEC07320.1 240 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana K-box region and MADS-box transcription
factor family protein protein.
ACCESSION CP002685-2621
PROTEIN_ID AEC07320.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="SVP"
/locus_tag="AT2G22540"
/gene_synonym="AGAMOUS-like 22"
/gene_synonym="AGL22"
/gene_synonym="AT2G22550"
/gene_synonym="F14M13.6"
/gene_synonym="F14M13_6"
/gene_synonym="FAQ1"
/gene_synonym="Flowering Arabidopsis QTL1"
/gene_synonym="SHORT VEGETATIVE PHASE"
/inference="Similar to RNA sequence,
EST:INSD:EH939800.1,INSD:EL272195.1,INSD:EL070005.1,
INSD:BP628814.1,INSD:EL003737.1,INSD:R65130.1,
INSD:EH904274.1,INSD:BP863489.1,INSD:EL174466.1,
INSD:BP667437.1,INSD:ES002633.1,INSD:BP778373.1,
INSD:EL155396.1,INSD:EH933854.1,INSD:EG503086.1,
INSD:EG512285.1,INSD:EL291671.1,INSD:BP582413.1,
INSD:EL050956.1,INSD:EL113328.1,INSD:EH849760.1,
INSD:EL185825.1,INSD:EH975398.1,INSD:EL052104.1,
INSD:AV825392.1,INSD:EG477513.1,INSD:EG482385.1,
INSD:EL256762.1,INSD:BP663278.1,INSD:EL216337.1,
INSD:EL329847.1,INSD:ES121865.1,INSD:EL024673.1,
INSD:EL202049.1,INSD:EG521218.1,INSD:EL155121.1,
INSD:AV791166.1,INSD:EL077864.1,INSD:EH819575.1,
INSD:AA651124.1,INSD:EL339816.1,INSD:EG521219.1,
INSD:ES061969.1,INSD:N38367.1,INSD:BP664233.1,
INSD:EH870545.1,INSD:EH961652.1,INSD:EL154642.1,
INSD:EL020298.1,INSD:EL172457.1"
/inference="similar to RNA sequence,
mRNA:INSD:AF211171.1,INSD:EU078687.1,INSD:AK226537.1,
INSD:BX842440.1,INSD:BX842456.1,INSD:BT033098.1,
INSD:AK175241.1,INSD:BX842431.1"
/note="SHORT VEGETATIVE PHASE (SVP); CONTAINS InterPro
DOMAIN/s: Transcription factor, MADS-box
(InterPro:IPR002100), Transcription factor, K-box
(InterPro:IPR002487); BEST Arabidopsis thaliana protein
match is: AGAMOUS-like 24 (TAIR:AT4G24540.1); Has 7469
Blast hits to 7448 proteins in 905 species: Archae - 3;
Bacteria - 14; Metazoa - 824; Fungi - 324; Plants - 6168;
Viruses - 0; Other Eukaryotes - 136 (source: NCBI BLink)."
/db_xref="Araport:AT2G22540"
/db_xref="TAIR:AT2G22540"
intron_pos 61:2 (1/8)
intron_pos 88:0 (2/8)
intron_pos 109:2 (3/8)
intron_pos 143:0 (4/8)
intron_pos 157:0 (5/8)
intron_pos 171:0 (6/8)
intron_pos 185:0 (7/8)
intron_pos 235:2 (8/8)
BEGIN
1 MAREKIQIRK IDNATARQVT FSKRRRGLFK KAEELSVLCD ADVALIIFSS TGKLFEFCSS
61 SMKEVLERHN LQSKNLEKLD QPSLELQLVE NSDHARMSKE IADKSHRLRQ MRGEELQGLD
121 IEELQQLEKA LETGLTRVIE TKSDKIMSEI SELQKKGMQL MDENKRLRQQ GTQLTEENER
181 LGMQICNNVH AHGGAESENA AVYEEGQSSE SITNAGNSTG APVDSESSDT SLRLGLPYGG
//