LOCUS AEC07307.1 476 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana riboflavin biosynthesis protein protein.
ACCESSION CP002685-2606
PROTEIN_ID AEC07307.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="RIBA2"
/locus_tag="AT2G22450"
/gene_synonym="AtRIBA2"
/gene_synonym="F14M13.15"
/gene_synonym="F14M13_15"
/gene_synonym="homolog of ribA 2"
/inference="Similar to RNA sequence,
EST:INSD:AU228524.1,INSD:EH976264.1,INSD:EL129546.1,
INSD:EH924482.1,INSD:EL284349.1,INSD:DR378724.1,
INSD:AU237453.1,INSD:ES039687.1,INSD:ES090409.1,
INSD:BP864236.1,INSD:BP787011.1,INSD:AV441409.1,
INSD:EH948756.1,INSD:EH804162.1,INSD:ES200802.1,
INSD:BP777660.1,INSD:ES032306.1,INSD:EL335131.1,
INSD:EH963374.1,INSD:ES043908.1,INSD:EL036241.1,
INSD:ES142206.1,INSD:DR282648.1,INSD:BP613287.1"
/inference="similar to RNA sequence,
mRNA:INSD:BT011627.1,INSD:AK228961.1,INSD:BT012273.1"
/note="riboflavin biosynthesis protein, putative;
FUNCTIONS IN: 3,4-dihydroxy-2-butanone-4-phosphate
synthase activity, GTP cyclohydrolase II activity;
INVOLVED IN: riboflavin biosynthetic process; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP
cyclohydrolase II (InterPro:IPR000926), Riboflavin
biosynthesis protein RibA (InterPro:IPR016299), DHBP
synthase RibB (InterPro:IPR000422), DHBP synthase
RibB-like alpha/beta domain (InterPro:IPR017945); BEST
Arabidopsis thaliana protein match is: GTP cyclohydrolase
II (TAIR:AT5G64300.1); Has 11284 Blast hits to 11282
proteins in 2317 species: Archae - 207; Bacteria - 6851;
Metazoa - 1; Fungi - 301; Plants - 119; Viruses - 0; Other
Eukaryotes - 3805 (source: NCBI BLink)."
/db_xref="Araport:AT2G22450"
/db_xref="TAIR:AT2G22450"
intron_pos 17:2 (1/6)
intron_pos 121:0 (2/6)
intron_pos 195:0 (3/6)
intron_pos 302:2 (4/6)
intron_pos 346:0 (5/6)
intron_pos 437:0 (6/6)
BEGIN
1 MASLTLRCDS THLLPSRDVV KGTKPFGTSL VYPRIISKKF NVRMRVIPEE GDVFSSSKSN
61 GSSMGIELQP DLVSFGTLAA EMIPTTMDSP EVEDEEFDLD RPTDGFASIP QAIEDIRHGK
121 MVVVVDDEDR ENEGDLIMAA SLATPEAMAF VVKHGTGIVC VSMKGEDLER LELPLMVTRK
181 DNEEKLRTAF TVSVDAKKGT STGVSARDRA QTILTLASKD SKPEDFNRPG HIFPLRYREG
241 GVLKRAGHTE ASVDLTVLAG LEPVSVLCEI VDDDGSMARL PRLRQFAQEN NLKLISIADL
301 IRYRRKRERL VEFTAVAPIP TMWGPFKAHC FKSLLDGVEH IAMVKGEIGD GKDILVRVHA
361 ECITDDIFGN SSGGKQLAIA MRLIEENGRG VFVYLRGPES KGIDLSHKPR TYNTNSDQAE
421 GVSFPVASRE YGIGAQILRD LGVREMKVMT NNPAHYVGLK GYGLSISGKV PLITTP
//