LOCUS AEC07305.1 311 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana homeobox protein 6 protein.
ACCESSION CP002685-2604
PROTEIN_ID AEC07305.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="HB6"
/locus_tag="AT2G22430"
/gene_synonym="ATHB6"
/gene_synonym="F14M13.17"
/gene_synonym="F14M13_17"
/gene_synonym="homeobox protein 6"
/inference="Similar to RNA sequence,
EST:INSD:EH926609.1,INSD:BP850307.1,INSD:BP856005.1,
INSD:EG486215.1,INSD:BP859169.1,INSD:AV810746.1,
INSD:BP618804.1,INSD:CA781656.1,INSD:BP783991.1,
INSD:EH926947.1,INSD:ES081874.1,INSD:Z17509.1,
INSD:AV439467.1,INSD:EL019860.1,INSD:EH950492.1,
INSD:AV799297.1,INSD:EH828217.1,INSD:EG482031.1,
INSD:ES098885.1,INSD:H77088.1,INSD:T21558.1,
INSD:EH943421.1,INSD:BP566565.1,INSD:EG457559.1,
INSD:AV803861.1,INSD:BP805558.1,INSD:EG480260.1,
INSD:BP582748.1,INSD:EL308421.1,INSD:EL204046.1,
INSD:ES019594.1,INSD:BP848947.1,INSD:AV803947.1,
INSD:EG525351.1,INSD:DR261510.1,INSD:AV784478.1,
INSD:EL245708.1,INSD:ES186199.1,INSD:BP607871.1,
INSD:BP788587.1,INSD:EH906964.1,INSD:BP854781.1,
INSD:BP828713.1,INSD:DR261508.1,INSD:EG480262.1,
INSD:BP658610.1,INSD:BP595586.1,INSD:CF774445.1,
INSD:BP808602.1,INSD:BP628318.1,INSD:BP605628.1,
INSD:BP788583.1,INSD:CB261547.1,INSD:EL286246.1,
INSD:BP801681.1,INSD:CD534757.1,INSD:T88114.1,
INSD:BP627132.1,INSD:EH904763.1,INSD:BP589186.1,
INSD:AV809252.1,INSD:EG480249.1,INSD:EL321843.1,
INSD:EH963989.1,INSD:BP621402.1,INSD:BP605465.1,
INSD:EL273493.1,INSD:AV816882.1,INSD:ES008017.1,
INSD:EL981010.1,INSD:BP812664.1,INSD:BP654342.1,
INSD:BP607908.1,INSD:BP564749.1,INSD:ES073829.1,
INSD:EL115496.1,INSD:EH914915.1,INSD:EL967308.1,
INSD:EH949720.1,INSD:BP859361.1,INSD:EG525584.1,
INSD:BP598967.1,INSD:EL203551.1,INSD:AV825688.1,
INSD:AV831233.1,INSD:EL029720.1,INSD:EG514402.1,
INSD:EG454816.1,INSD:EL034071.1,INSD:DR261512.1,
INSD:BP604895.1,INSD:BP797833.1,INSD:BP668922.1,
INSD:ES150455.1,INSD:ES207780.1,INSD:AV793978.1,
INSD:AV784452.1,INSD:EH988399.1,INSD:AV816594.1,
INSD:EL309961.1,INSD:EL130015.1,INSD:EH830060.1,
INSD:EL134966.1,INSD:EH983284.1,INSD:EG520970.1,
INSD:DR749862.1,INSD:EL279947.1,INSD:BP828484.1,
INSD:BP799936.1,INSD:EL096176.1,INSD:AV815767.1,
INSD:BP579299.1,INSD:BP632875.1,INSD:EL092956.1,
INSD:EH852698.1,INSD:ES016472.1,INSD:Z29787.1,
INSD:EH852331.1,INSD:EL077257.1,INSD:ES095868.1,
INSD:BP598196.1,INSD:ES139815.1,INSD:EH926785.1,
INSD:EH876081.1,INSD:AV521872.1,INSD:EG525585.1,
INSD:ES099839.1,INSD:ES020990.1,INSD:BP806001.2,
INSD:ES016942.1,INSD:ES111589.1,INSD:EL320496.1,
INSD:AV831289.1,INSD:T46345.1,INSD:ES107562.1,
INSD:EH934495.1,INSD:DR749863.1,INSD:EH978894.1,
INSD:AV810701.1,INSD:ES014710.1,INSD:AA394449.1,
INSD:ES054558.1,INSD:EL075841.1,INSD:ES020351.1,
INSD:ES011816.1,INSD:AV531819.1,INSD:BP811068.1,
INSD:EH829918.1,INSD:EG480259.1,INSD:EH817618.1,
INSD:EL211615.1,INSD:ES213534.1,INSD:EL227203.1,
INSD:AV786882.1,INSD:BP811942.1,INSD:BP615012.1,
INSD:BP666774.1,INSD:BP658671.1,INSD:EL002166.1,
INSD:AV788997.1,INSD:BP567053.1,INSD:BP603901.1,
INSD:BP569788.1,INSD:BP584486.1,INSD:EL990057.1,
INSD:AV441576.1,INSD:BP669145.1,INSD:EH974522.1,
INSD:EL284905.1,INSD:BP864849.1,INSD:BP855013.1,
INSD:EG514423.1,INSD:BP566289.1,INSD:AV793940.1,
INSD:BP859145.1,INSD:ES071387.1,INSD:EL086988.1,
INSD:EL010968.1,INSD:BP806861.1,INSD:BP631801.1,
INSD:DR261511.1,INSD:BP620961.1,INSD:T04337.1,
INSD:BP788838.1,INSD:EH814495.1,INSD:EH987245.1,
INSD:ES109526.1,INSD:EL109346.1,INSD:ES070686.1,
INSD:BP589234.1,INSD:EH959495.1,INSD:CB258247.1,
INSD:BP592840.1,INSD:EL013427.1,INSD:EH828482.1,
INSD:BP584947.1,INSD:BP649464.1,INSD:BP854290.1,
INSD:AV791966.1,INSD:EH969887.1,INSD:BP865203.1,
INSD:DR261514.1,INSD:BP574706.1,INSD:BP573724.1,
INSD:EL274247.1,INSD:BP568635.1,INSD:EL341434.1,
INSD:BP601839.1,INSD:EL296808.1,INSD:EG480246.1,
INSD:EH851083.1,INSD:ES094057.1,INSD:AA395785.1,
INSD:BP808850.1,INSD:EL277065.1,INSD:BP588223.1,
INSD:CF651992.1,INSD:CB258051.1,INSD:EL061258.1,
INSD:AV790312.1,INSD:BP667389.1,INSD:EL224774.1,
INSD:BP607662.1,INSD:BP598483.1,INSD:BP655347.1,
INSD:DR261513.1,INSD:BP604509.1,INSD:AI999190.1,
INSD:EG514660.1,INSD:EL273447.1,INSD:BP609237.1,
INSD:ES211848.1,INSD:EL011521.1,INSD:AA394379.1,
INSD:BP615436.1,INSD:BP605662.1,INSD:EG525352.1,
INSD:ES138877.1,INSD:EL216860.1,INSD:ES069575.1,
INSD:EG514665.1,INSD:AV823498.1,INSD:BP620941.1,
INSD:ES102416.1,INSD:EL277380.1,INSD:DR261509.1,
INSD:CK120341.1,INSD:EL309829.1,INSD:ES147007.1,
INSD:BP860113.1,INSD:BP852657.1,INSD:EG514680.1,
INSD:ES009986.1,INSD:BP604672.1,INSD:EG523516.1,
INSD:BP631645.1,INSD:EL026694.1,INSD:EG523515.1,
INSD:EH894574.1,INSD:BP619013.1,INSD:AV815565.1,
INSD:EL149197.1,INSD:CB262037.1,INSD:DR383796.1,
INSD:BP599849.1,INSD:AV806402.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY122903.1,INSD:AY060569.1,INSD:AY094457.1,
INSD:AY063819.1,INSD:X67034.1"
/note="homeobox protein 6 (HB6); FUNCTIONS IN: protein
binding, sequence-specific DNA binding, DNA binding,
transcription activator activity, sequence-specific DNA
binding transcription factor activity; INVOLVED IN:
response to water deprivation, positive regulation of
transcription, abscisic acid mediated signaling pathway,
negative regulation of abscisic acid mediated signaling
pathway, regulation of transcription, DNA-dependent;
LOCATED IN: nucleus; EXPRESSED IN: 26 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970),
Homeobox (InterPro:IPR001356), Homeodomain-like
(InterPro:IPR009057), Helix-turn-helix motif, lambda-like
repressor (InterPro:IPR000047), Leucine zipper,
homeobox-associated (InterPro:IPR003106),
Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis
thaliana protein match is: homeobox protein 16
(TAIR:AT4G40060.1); Has 10935 Blast hits to 10899 proteins
in 558 species: Archae - 5; Bacteria - 20; Metazoa - 8544;
Fungi - 195; Plants - 1932; Viruses - 5; Other Eukaryotes
- 234 (source: NCBI BLink)."
/db_xref="Araport:AT2G22430"
/db_xref="TAIR:AT2G22430"
intron_pos 24:1 (1/2)
intron_pos 151:0 (2/2)
BEGIN
1 MMKRLSSSDS VGGLISLCPT TSTDEQSPRR YGGREFQSML EGYEEEEEAI VEERGHVGLS
61 EKKRRLSINQ VKALEKNFEL ENKLEPERKV KLAQELGLQP RQVAVWFQNR RARWKTKQLE
121 KDYGVLKTQY DSLRHNFDSL RRDNESLLQE ISKLKTKLNG GGGEEEEEEN NAAVTTESDI
181 SVKEEEVSLP EKITEAPSSP PQFLEHSDGL NYRSFTDLRD LLPLKAAASS FAAAAGSSDS
241 SDSSALLNEE SSSNVTVAAP VTVPGGNFFQ FVKMEQTEDH EDFLSGEEAC EFFSDEQPPS
301 LHWYSTVDHW N
//