LOCUS       AEC07291.1               365 aa    PRT              PLN 23-MAR-2023
DEFINITION  Arabidopsis thaliana ubiquitin-specific protease 4 protein.
ACCESSION   CP002685-2588
PROTEIN_ID  AEC07291.1
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 19698289)
  AUTHORS   Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
            Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
            Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
            Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
            Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
            Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
            Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
            Venter,J.C.
  TITLE     Sequence and analysis of chromosome 2 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 402 (6763), 761-768 (1999)
   PUBMED   10617197
REFERENCE   2  (bases 1 to 19698289)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE   3  (bases 1 to 19698289)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
FEATURES             Qualifiers
     source          /organism="Arabidopsis thaliana"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:3702"
                     /chromosome="2"
                     /ecotype="Columbia"
     protein         /gene="UBP4"
                     /locus_tag="AT2G22310"
                     /gene_synonym="ATUBP4"
                     /gene_synonym="T26C19.3"
                     /gene_synonym="T26C19_3"
                     /gene_synonym="ubiquitin-specific protease 4"
                     /gene_synonym="UBIQUITIN-SPECIFIC PROTEASE 4"
                     /inference="Similar to RNA sequence,
                     EST:INSD:BP851291.1,INSD:BP843535.1,INSD:AA651474.1,
                     INSD:BP637685.1,INSD:DR376186.1,INSD:BP778677.1,
                     INSD:BP835842.1,INSD:BP825412.1,INSD:AV547626.1,
                     INSD:AV793828.1,INSD:AV826161.1,INSD:BP794062.1,
                     INSD:BP795851.1,INSD:BP833061.1,INSD:AV787180.1,
                     INSD:BE529064.1,INSD:BP601919.1,INSD:BP657923.1,
                     INSD:BP606583.1,INSD:DR343175.1,INSD:ES121261.1,
                     INSD:AI995554.1,INSD:DR343176.1,INSD:EH993349.1,
                     INSD:BP643947.1,INSD:AV541019.1,INSD:BE529243.1"
                     /inference="similar to RNA sequence,
                     mRNA:INSD:AY048261.1,INSD:U76846.1,INSD:AY072625.1,
                     INSD:AY087731.1"
                     /note="ubiquitin-specific protease 4 (UBP4); CONTAINS
                     InterPro DOMAIN/s: Peptidase C19, ubiquitin
                     carboxyl-terminal hydrolase 2, conserved site
                     (InterPro:IPR018200), Peptidase C19, ubiquitin
                     carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST
                     Arabidopsis thaliana protein match is: ubiquitin-specific
                     protease 3 (TAIR:AT4G39910.1); Has 8879 Blast hits to 7429
                     proteins in 247 species: Archae - 0; Bacteria - 4; Metazoa
                     - 4505; Fungi - 1682; Plants - 966; Viruses - 3; Other
                     Eukaryotes - 1719 (source: NCBI BLink)."
                     /db_xref="Araport:AT2G22310"
                     /db_xref="TAIR:AT2G22310"
     intron_pos      40:0 (1/5)
     intron_pos      77:0 (2/5)
     intron_pos      110:0 (3/5)
     intron_pos      173:0 (4/5)
     intron_pos      233:2 (5/5)
BEGIN
        1 MGAAGSKLEK ALGDQFPEGE RYFGFENFGN TCYCNSVLQA LYFCAPFREQ LLEHYANNKA
       61 DAEENLLTCL ADLFSQISSQ KKKTGVIAPK RFVQRLKKQN ELFRSYMHQD AHEFLNYLLN
      121 ELVEILEKET QATKADNETS SSPEKIANVL KAPLANGVHK EPIVTWVHKI FQGILTNETR
      181 CLRCETVTAR DETFLDLSLD IEQNSSITSC LKNFSSTETL HAEDKFFCDK CCSLQEAQKR
      241 MKIKKPPHIL VIHLKRFKYM EQLGRYKKLS YRVVFPLELK LSNTVDEYVD IEYSLFAVVV
      301 HVGSGPNHGH YVSLVKSHNH WLFFDDESVE IIEESAVQTF FGSSQEYSSN TDHGYILLYE
      361 SLGTR
//