LOCUS AEC07288.1 207 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana RAB GTPase homolog H1D protein.
ACCESSION CP002685-2584
PROTEIN_ID AEC07288.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="RABH1d"
/locus_tag="AT2G22290"
/gene_synonym="ARABIDOPSIS RAB GTPASE HOMOLOG 6"
/gene_synonym="ARABIDOPSIS RAB GTPASE HOMOLOG H1D"
/gene_synonym="ATRAB-H1D"
/gene_synonym="ATRAB6"
/gene_synonym="ATRABH1D"
/gene_synonym="RAB GTPase homolog H1D"
/gene_synonym="RAB GTPASE HOMOLOG H1D"
/gene_synonym="RAB-H1D"
/gene_synonym="T26C19.5"
/gene_synonym="T26C19_5"
/note="RAB GTPase homolog H1D (RABH1d); FUNCTIONS IN: GTP
binding; INVOLVED IN: protein transport, small GTPase
mediated signal transduction; LOCATED IN: mitochondrion;
EXPRESSED IN: male gametophyte, flower, pollen tube;
EXPRESSED DURING: L mature pollen stage, M germinated
pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Ras
GTPase (InterPro:IPR001806), Small GTP-binding protein
(InterPro:IPR005225), Small GTPase (InterPro:IPR020851),
Ras (InterPro:IPR013753), Ras small GTPase, Rab type
(InterPro:IPR003579), Rab6-related (InterPro:IPR015600);
BEST Arabidopsis thaliana protein match is: RAB GTPase
homolog H1E (TAIR:AT5G10260.1); Has 26960 Blast hits to
26930 proteins in 721 species: Archae - 17; Bacteria -
142; Metazoa - 14130; Fungi - 3768; Plants - 3162; Viruses
- 20; Other Eukaryotes - 5721 (source: NCBI BLink)."
/db_xref="Araport:AT2G22290"
/db_xref="TAIR:AT2G22290"
intron_pos 40:0 (1/3)
intron_pos 63:2 (2/3)
intron_pos 130:2 (3/3)
BEGIN
1 MASVSPLAKY KLVFLGDQSV GKTSIITRFM YDKFDTTYQA TIGIDFLSKT MYLEDRTVRL
61 QLWDTAGQER FRSLIPSYIR DSSVAVVVYD VANRLSFLNT SKWIEEVRNE RAGDVIIVLV
121 GNKTDLVEKR QVSIEEGDSK GREYGVMFIE TSAKAGFNIK PLFRKIAAAL PGMESYSNTK
181 NEDMVDVNLK PTSNSSQGDQ QGGACSC
//