LOCUS AEC07277.1 261 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Integrase-type DNA-binding superfamily
protein protein.
ACCESSION CP002685-2564
PROTEIN_ID AEC07277.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G22200"
/gene_synonym="T26C19.14"
/gene_synonym="T26C19_14"
/inference="Similar to RNA sequence,
EST:INSD:EL323473.1,INSD:EL335137.1,INSD:BP619256.1,
INSD:EL296531.1,INSD:AV815682.1,INSD:EH830493.1,
INSD:EL199090.1,INSD:EL151966.1,INSD:AV831270.1,
INSD:BP804922.1,INSD:DR364287.1,INSD:EL099219.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY143836.1,INSD:AY090378.1"
/note="Integrase-type DNA-binding superfamily protein;
FUNCTIONS IN: DNA binding, sequence-specific DNA binding
transcription factor activity; INVOLVED IN: regulation of
transcription, DNA-dependent; LOCATED IN: nucleus;
CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type
(InterPro:IPR016177), Pathogenesis-related transcriptional
factor/ERF, DNA-binding (InterPro:IPR001471); BEST
Arabidopsis thaliana protein match is: Integrase-type
DNA-binding superfamily protein (TAIR:AT4G39780.1); Has
5636 Blast hits to 5603 proteins in 247 species: Archae -
0; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 5606;
Viruses - 6; Other Eukaryotes - 16 (source: NCBI BLink)."
/db_xref="Araport:AT2G22200"
/db_xref="TAIR:AT2G22200"
BEGIN
1 METASLSFPV PNTSFGVNKS MPLGLNQLTP YQIHQIQNQL NHRRSTISNL SPNRIRMKNL
61 TPSTSKTKNL YRGVRQRHWG KWVAEIRLPK NRTRLWLGTF ETAEKAALAY DQAAFQLRGD
121 IAKLNFPNLI HEDMNPLPSS VDTKLQAICK SLRKTEEICS VSDQTKEYSV YSVSDKTELF
181 LPKAELFLPK REHLETNELS NESPRSDETS LLDESQAEYS SSDKTFLDFS DTEFEEIGSF
241 GLRKFPSVEI DWDAISKLAN S
//