LOCUS AEC07265.1 324 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana RING/FYVE/PHD zinc finger superfamily
protein protein.
ACCESSION CP002685-2551
PROTEIN_ID AEC07265.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G22120"
/gene_synonym="T16B14.3"
/gene_synonym="T16B14_3"
/inference="Similar to RNA sequence,
EST:INSD:EL092840.1,INSD:AV550567.1,INSD:DR282864.1,
INSD:DR374808.1,INSD:ES164574.1,INSD:AU228017.1,
INSD:DR282862.1,INSD:DR282861.1,INSD:EL163028.1,
INSD:EL128264.1,INSD:ES128116.1,INSD:ES002434.1,
INSD:BP650134.1,INSD:BP810578.1,INSD:AV558233.1,
INSD:ES197513.1,INSD:AU237003.1,INSD:EL062478.1,
INSD:EH808467.1,INSD:DR282863.1,INSD:EH844455.1,
INSD:ES143931.1,INSD:EL197785.1,INSD:AV538315.1,
INSD:ES040481.1,INSD:ES130061.1,INSD:ES078881.1,
INSD:EG498744.1,INSD:EG498743.1"
/inference="similar to RNA sequence,
mRNA:INSD:BT004982.1,INSD:BT004029.1,INSD:BX819448.1"
/note="RING/FYVE/PHD zinc finger superfamily protein;
FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Zinc finger, RING-CH-type
(InterPro:IPR011016); BEST Arabidopsis thaliana protein
match is: RING/FYVE/PHD zinc finger superfamily protein
(TAIR:AT1G11020.1); Has 1371 Blast hits to 1337 proteins
in 201 species: Archae - 0; Bacteria - 0; Metazoa - 554;
Fungi - 187; Plants - 354; Viruses - 29; Other Eukaryotes
- 247 (source: NCBI BLink)."
/db_xref="Araport:AT2G22120"
/db_xref="TAIR:AT2G22120"
intron_pos 43:1 (1/6)
intron_pos 72:0 (2/6)
intron_pos 121:0 (3/6)
intron_pos 157:1 (4/6)
intron_pos 198:2 (5/6)
intron_pos 290:0 (6/6)
BEGIN
1 MADELELSPL VPPSPMVEPS EIDLEAGGPG EQIQCRICLE TDGRDFIAPC KCKGTSKYVH
61 RDCLDHWRAI KEGFAFAHCT TCKAPYYLRV HSAGDRKWRT LKFRFFVTRD ILSIFLAVQL
121 VIAALAYMVY FIDSYQQSWL RHIWGFDSEV TFYYMCGALL FFALLGLSGC VITCYDRRVR
181 NDLAQPCREL CLCCCQPGIC TDCHLPGTIC MWADCTACTE GCASAVSECG GCLGGAGEAG
241 LPLLFITALV ILGLFTVIGI FYSVLVATMV GQRIWQRHYH ILAKRMLTKE YVVEDVDGEM
301 TGSEWSPPAL PTEHVQQLKT LGLL
//