LOCUS AEC07254.1 313 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Transducin/WD40 repeat-like superfamily
protein protein.
ACCESSION CP002685-2539
PROTEIN_ID AEC07254.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="LST8-2"
/locus_tag="AT2G22040"
/gene_synonym="Lethal with Sec Thirteen 8-2"
/gene_synonym="T16B14.11"
/gene_synonym="T16B14_11"
/inference="Similar to RNA sequence, EST:INSD:ES209519.1"
/note="Transducin/WD40 repeat-like superfamily protein;
CONTAINS InterPro DOMAIN/s: WD40 repeat 2
(InterPro:IPR019782), WD40 repeat, conserved site
(InterPro:IPR019775), WD40 repeat (InterPro:IPR001680),
G-protein beta WD-40 repeat, region (InterPro:IPR020472),
WD40 repeat-like-containing domain (InterPro:IPR011046),
WD40-repeat-containing domain (InterPro:IPR017986),
WD40/YVTN repeat-like-containing domain
(InterPro:IPR015943), WD40 repeat, subgroup
(InterPro:IPR019781); BEST Arabidopsis thaliana protein
match is: Transducin/WD40 repeat-like superfamily protein
(TAIR:AT3G18140.1); Has 70174 Blast hits to 28024 proteins
in 780 species: Archae - 70; Bacteria - 9367; Metazoa -
29122; Fungi - 15154; Plants - 7922; Viruses - 0; Other
Eukaryotes - 8539 (source: NCBI BLink)."
/db_xref="Araport:AT2G22040"
/db_xref="TAIR:AT2G22040"
intron_pos 42:0 (1/9)
intron_pos 77:0 (2/9)
intron_pos 114:2 (3/9)
intron_pos 138:0 (4/9)
intron_pos 164:0 (5/9)
intron_pos 203:0 (6/9)
intron_pos 230:2 (7/9)
intron_pos 258:1 (8/9)
intron_pos 278:1 (9/9)
BEGIN
1 MFENKPDDSP VYLATASHDQ TIRLWQARTG RCYFSFRYPD LHVNRLELTP EKGKLVAACN
61 PHIRLFDLRS YNPHIPVRNF VSHTKNVMAV GFQYTGHMMY SGSEDGSVKI WDLRVRECQR
121 EFRSVSPVNT VVLHPNQTEL ISGDQNGNIR VWDLRADLCS CELVPEVGTP IRSLTVMWDG
181 TMVVAANDRG TCYVWRSLCE RQTMTEFEPL HKLQAHNSHI LKCLLSPGNN RYLATASSDK
241 TVKIWNLDGF KLEKVLTGHE RWVWDCDFSM DGEYLVTASS DTTARLWSMR AGKEEMVYQA
301 HRKATVCCTL LRD
//