LOCUS AEC07233.1 212 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana RAB GTPase homolog 7A protein.
ACCESSION CP002685-2514
PROTEIN_ID AEC07233.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="RAB7A"
/locus_tag="AT2G21880"
/gene_synonym="ARABIDOPSIS RAB GTPASE HOMOLOG G2"
/gene_synonym="ATRAB7A"
/gene_synonym="ATRABG2"
/gene_synonym="F7D8.20"
/gene_synonym="F7D8_20"
/gene_synonym="RAB GTPase homolog 7A"
/inference="Similar to RNA sequence,
EST:INSD:AU238224.1,INSD:DR247714.1,INSD:EL160090.1,
INSD:EH909079.1,INSD:AI994901.1,INSD:DR247713.1,
INSD:EH899954.1,INSD:DR380385.1,INSD:AU229369.1,
INSD:T43399.1,INSD:EL073645.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY084960.1,INSD:BT024593.1,INSD:AK229492.1,
INSD:AB071852.1,INSD:BX822045.1"
/note="RAB GTPase homolog 7A (RAB7A); FUNCTIONS IN: GTP
binding; INVOLVED IN: protein transport, small GTPase
mediated signal transduction; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 14 growth stages; CONTAINS
InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small
GTP-binding protein (InterPro:IPR005225), Small GTPase
(InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small
GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis
thaliana protein match is: RAB GTPase homolog G3A
(TAIR:AT4G09720.1); Has 26543 Blast hits to 26510 proteins
in 728 species: Archae - 26; Bacteria - 127; Metazoa -
13845; Fungi - 3980; Plants - 2847; Viruses - 20; Other
Eukaryotes - 5698 (source: NCBI BLink)."
/db_xref="Araport:AT2G21880"
/db_xref="TAIR:AT2G21880"
intron_pos 19:2 (1/6)
intron_pos 28:2 (2/6)
intron_pos 62:0 (3/6)
intron_pos 111:0 (4/6)
intron_pos 138:0 (5/6)
intron_pos 188:2 (6/6)
BEGIN
1 MDSLKNRTLL KVIVLGDSGV GKTSLMNQYV YKKFNKQYKA TIGADFVTKE LHIDEKSVTL
61 QIWDTAGQER FQSLGAAFYR GADCCVLVYD VNNLKSFETL NNWHTEFLKQ ANPMEPETFP
121 FVLIGNKTDV DGGNSRVVSN KRAIEWCGSK GNIPYHETSA KEDTNIDEAF LSVAHIALSN
181 ERKQSNDIYP RGQYHDSVTD IIDPDQSRGC AC
//