LOCUS AEC07230.1 522 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana violaxanthin de-epoxidase-like protein
protein.
ACCESSION CP002685-2510
PROTEIN_ID AEC07230.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G21860"
/gene_synonym="F7D8.18"
/gene_synonym="F7D8_18"
/inference="Similar to RNA sequence,
EST:INSD:BP857416.1,INSD:BX839388.1,INSD:EL341682.1,
INSD:BP862855.1,INSD:BX835586.1,INSD:AV822288.1,
INSD:BP611589.1,INSD:DR376233.1,INSD:DR340176.1,
INSD:AV521196.1,INSD:EL183124.1,INSD:BP607226.1,
INSD:AV442551.1,INSD:CK121821.1,INSD:EL315915.1,
INSD:EL039247.1,INSD:AV783010.1,INSD:CF773542.1,
INSD:BP614269.1,INSD:BP780511.1,INSD:EL044037.1,
INSD:BP603832.1,INSD:BP663678.1,INSD:BP595194.1,
INSD:BP607303.1,INSD:DR340175.1,INSD:EH951555.1,
INSD:AV527894.1,INSD:DR340174.1,INSD:AV441167.1,
INSD:BP588256.1"
/inference="similar to RNA sequence,
mRNA:INSD:BT000513.1,INSD:AY087799.1,INSD:AY039866.1"
/note="violaxanthin de-epoxidase-related; BEST Arabidopsis
thaliana protein match is: non-photochemical quenching 1
(TAIR:AT1G08550.2); Has 151 Blast hits to 151 proteins in
39 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 126; Viruses - 0; Other Eukaryotes - 25
(source: NCBI BLink)."
/db_xref="Araport:AT2G21860"
/db_xref="TAIR:AT2G21860"
intron_pos 99:0 (1/1)
BEGIN
1 MAAIPLKAPS LPGTRECSPF LNRFVTHQPV NFIRKFHPSL DEASFSRRGR TTVVRVLETE
61 KSTKIEKPEP PVKLIALVGK GEVSPLKSTS WEEVMLHTAR RLKWVDEGYE MLVFDDEIVS
121 SNDQRAMNLT QELNQTDILV VVAVNNSESV NWIQTNSKNV KNMICFESSP NLMNRLGGTD
181 VGSVNKDKEV TEVVKTVGDA WERRNSDDIR FCLLVIINAY IRPVPVLQNL RSKGFSTLSC
241 MVKNCGPQIL NCLLDPNCRK ALQCLNQCSP VDQVCSYRCI ASYEGPYFEA FSLCVLQKHN
301 CLELDAKIPE KPYVPPMTSF RGKELCHDTA EDLFVGWLGE LEWSWRVVAG QNPAYDQFPC
361 QYQLFYRGKG KSSFWYEPVF QVRTLEEKLV WRRRRYSVKR GKIPATFRFS VLDNGVVSNE
421 FWTIVDVSDD LSWGLFHYHG AARVAGQSYT GAVLVTPDGS YPAEKDKERL QSALEKCGIK
481 EWELFAVDNC SCENPPLGIP QGSRLHSRIS IIEEPDSEEK FN
//