LOCUS AEC07222.1 816 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana ribonucleotide reductase 1 protein.
ACCESSION CP002685-2500
PROTEIN_ID AEC07222.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="RNR1"
/locus_tag="AT2G21790"
/gene_synonym="ATRNR1"
/gene_synonym="CLS8"
/gene_synonym="CRINKLY LEAVES 8"
/gene_synonym="defective in pollen organelle DNA
degradation 2"
/gene_synonym="DPD2"
/gene_synonym="R1"
/gene_synonym="ribonucleotide reductase 1"
/gene_synonym="RIBONUCLEOTIDE REDUCTASE 1"
/gene_synonym="RIBONUCLEOTIDE REDUCTASE LARGE SUBUNIT 1"
/inference="Similar to RNA sequence,
EST:INSD:EL338870.1,INSD:ES210609.1,INSD:AV812942.1,
INSD:CF773588.1,INSD:ES060212.1,INSD:BP867747.1,
INSD:ES078448.1,INSD:EG457859.1,INSD:EL263235.1,
INSD:BE526586.1,INSD:EH982638.1,INSD:AV803303.1,
INSD:ES118537.1,INSD:BP639245.1,INSD:CF773363.1,
INSD:AV816067.1,INSD:EL101352.1,INSD:ES174313.1,
INSD:BP608854.1,INSD:BP611926.1,INSD:EL987171.1,
INSD:AV526406.1,INSD:ES035706.1,INSD:EH943693.1,
INSD:ES135254.1,INSD:T42456.1,INSD:EH975865.1,
INSD:EH847259.1,INSD:BP797120.1,INSD:EH928798.1,
INSD:ES118988.1,INSD:EL302113.1,INSD:ES173874.1,
INSD:AV798199.1,INSD:ES189279.1,INSD:AV827426.1,
INSD:EL087168.1"
/inference="similar to RNA sequence,
mRNA:INSD:AF325052.2,INSD:AF092841.1,INSD:AY035080.1,
INSD:BX821185.1,INSD:BT008573.1"
/note="ribonucleotide reductase 1 (RNR1); FUNCTIONS IN:
ribonucleoside-diphosphate reductase activity, ATP
binding; INVOLVED IN: response to cadmium ion, DNA
replication, deoxyribonucleoside triphosphate biosynthetic
process; LOCATED IN: ribonucleoside-diphosphate reductase
complex; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Ribonucleotide reductase large subunit, N-terminal
(InterPro:IPR013509), Ribonucleoside-diphosphate
reductase, alpha subunit (InterPro:IPR013346), ATP-cone
(InterPro:IPR005144), Ribonucleotide reductase large
subunit, C-terminal (InterPro:IPR000788), Ribonucleotide
reductase R1 subunit, N-terminal (InterPro:IPR008926); Has
15326 Blast hits to 14804 proteins in 2790 species: Archae
- 206; Bacteria - 6388; Metazoa - 177; Fungi - 215; Plants
- 88; Viruses - 606; Other Eukaryotes - 7646 (source: NCBI
BLink)."
/db_xref="Araport:AT2G21790"
/db_xref="TAIR:AT2G21790"
intron_pos 77:0 (1/16)
intron_pos 97:2 (2/16)
intron_pos 127:0 (3/16)
intron_pos 215:0 (4/16)
intron_pos 295:1 (5/16)
intron_pos 321:0 (6/16)
intron_pos 378:0 (7/16)
intron_pos 409:0 (8/16)
intron_pos 459:0 (9/16)
intron_pos 488:0 (10/16)
intron_pos 543:0 (11/16)
intron_pos 583:0 (12/16)
intron_pos 650:2 (13/16)
intron_pos 700:2 (14/16)
intron_pos 750:0 (15/16)
intron_pos 778:0 (16/16)
BEGIN
1 MYVVKRDGRQ ETVHFDKITA RLKKLSYGLS SDHCDPVLVA QKVCAGVYKG VTTSQLDELA
61 AETAAAMTCN HPDYASLAAR IAVSNLHKNT KKSFSETIKD MFYHVNDRSG LKSPLIADDV
121 FEIIMQNAAR LDSEIIYDRD FEYDYFGFKT LERSYLLKVQ GTVVERPQHM LMRVAVGIHK
181 DDIDSVIQTY HLMSQRWFTH ASPTLFNAGT PRPQLSSCFL VCMKDDSIEG IYETLKECAV
241 ISKSAGGIGV SVHNIRATGS YIRGTNGTSN GIVPMLRVFN DTARYVDQGG GKRKGAFAVY
301 LEPWHADVYE FLELRKNHGK EEHRARDLFY ALWLPDLFME RVQNNGQWSL FCPNEAPGLA
361 DCWGAEFETL YTKYEREGKA KKVVQAQQLW YEILTSQVET GTPYMLFKDS CNRKSNQQNL
421 GTIKSSNLCT EIIEYTSPTE TAVCNLASIA LPRFVREKGV PLDSHPPKLA GSLDSKNRYF
481 DFEKLAEVTA TVTVNLNKII DVNYYPVETA KTSNMRHRPI GIGVQGLADA FILLGMPFDS
541 PEAQQLNKDI FETIYYHALK ASTELAARLG PYETYAGSPV SKGILQPDMW NVIPSDRWDW
601 AVLRDMISKN GVRNSLLVAP MPTASTSQIL GNNECFEPYT SNIYSRRVLS GEFVVVNKHL
661 LHDLTDMGLW TPTLKNKLIN ENGSIVNVAE IPDDLKAIYR TVWEIKQRTV VDMAADRGCY
721 IDQSQSLNIH MDKPNFAKLT SLHFYTWKKG LKTGMYYLRS RAAADAIKFT VDTAMLKEKP
781 SVAEGDKEVE EEDNETKLAQ MVCSLTNPEE CLACGS
//