LOCUS AEC07176.1 468 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana IBR domain containing protein protein.
ACCESSION CP002685-2432
PROTEIN_ID AEC07176.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G21420"
/gene_synonym="F3K23.18"
/gene_synonym="F3K23_18"
/inference="similar to RNA sequence, mRNA:INSD:DQ446542.1"
/note="IBR domain containing protein; FUNCTIONS IN: zinc
ion binding; INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; EXPRESSED IN:
sperm cell; CONTAINS InterPro DOMAIN/s: Zinc finger,
RING-type (InterPro:IPR001841), Zinc finger, C6HC-type
(InterPro:IPR002867); BEST Arabidopsis thaliana protein
match is: RING/U-box superfamily protein
(TAIR:AT5G37560.1); Has 87308 Blast hits to 18333 proteins
in 957 species: Archae - 370; Bacteria - 41195; Metazoa -
14245; Fungi - 8075; Plants - 4321; Viruses - 1278; Other
Eukaryotes - 17824 (source: NCBI BLink)."
/db_xref="Araport:AT2G21420"
/db_xref="TAIR:AT2G21420"
intron_pos 137:0 (1/2)
intron_pos 367:2 (2/2)
BEGIN
1 MEKHDLTLIS KKRRIDFATT GDIPNLKGEG VSMVAESASA SNIFADSLVY RLFFKGLVSD
61 ETTTDMEEIV KAGFGIAICD EANTLLYNMK KSLNGDDVIN PEEVEIKALI CVLNVSIQME
121 LRNVMICCGD YQIFQILTGR GKPQQNIVHL VEQVQHLRGK LSSTEVVLVP RADVIILAIE
181 AIGGETCCIC RENTDADRMF FTENCFHRQC FSCVNRHVQR MLLCGISPTC LHFPCNSELT
241 FESCSKVLTP NLIEFWKRKI EEDLVPAADK IYCPYRRCSM LMSKTALSRE TDQSNVRACI
301 KCCRLFCIDC KVPSHAGLSC VDYKKLNPDP LYDVKLKSLA NKKKWRQCVQ CSNLVELFEG
361 CNHITCRCGF EFCYVCGKEW NQRGCLSPGC DDDDDDDDDD DDDDDDDDDD DDDDDDDEDD
421 EDDGYIDSDD DDVDGDDNDD GSELDGINFE DFAVHLPKDV NEQKDESN
//