LOCUS AEC07128.1 337 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana XAP5 family protein protein.
ACCESSION CP002685-2366
PROTEIN_ID AEC07128.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="XCT"
/locus_tag="AT2G21150"
/gene_synonym="F26H11.9"
/gene_synonym="F26H11_9"
/gene_synonym="XAP5 CIRCADIAN TIMEKEEPER"
/inference="Similar to RNA sequence,
EST:INSD:BP642841.1,INSD:AV789535.1,INSD:ES203874.1,
INSD:EL108886.1,INSD:BP817879.1,INSD:DR209841.1,
INSD:ES122704.1,INSD:DR209842.1,INSD:DR209839.1,
INSD:DR209840.1,INSD:EL302149.1,INSD:DR373037.1,
INSD:ES122001.1,INSD:BP829671.1,INSD:BP842033.1,
INSD:ES129123.1,INSD:ES165251.1,INSD:BP561358.2,
INSD:ES075036.1,INSD:ES106076.1,INSD:BP649800.1,
INSD:ES198662.1,INSD:BP594436.1,INSD:EL986217.1,
INSD:ES114668.1,INSD:AV526621.1,INSD:CK119528.1,
INSD:AV520365.1,INSD:BP646822.1,INSD:ES194848.1,
INSD:ES193557.1"
/inference="similar to RNA sequence,
mRNA:INSD:BT000912.1,INSD:AY080816.1"
/note="XAP5 CIRCADIAN TIMEKEEPER (XCT); FUNCTIONS IN:
molecular_function unknown; INVOLVED IN: regulation of
circadian rhythm, response to blue light, response to red
light, regulation of photomorphogenesis; LOCATED IN:
nucleus; EXPRESSED IN: 8 plant structures; CONTAINS
InterPro DOMAIN/s: XAP5 protein (InterPro:IPR007005); Has
1721 Blast hits to 1474 proteins in 237 species: Archae -
2; Bacteria - 40; Metazoa - 614; Fungi - 190; Plants - 85;
Viruses - 22; Other Eukaryotes - 768 (source: NCBI
BLink)."
/db_xref="Araport:AT2G21150"
/db_xref="TAIR:AT2G21150"
intron_pos 58:0 (1/11)
intron_pos 80:0 (2/11)
intron_pos 101:2 (3/11)
intron_pos 140:1 (4/11)
intron_pos 166:2 (5/11)
intron_pos 192:1 (6/11)
intron_pos 213:0 (7/11)
intron_pos 257:0 (8/11)
intron_pos 275:0 (9/11)
intron_pos 297:0 (10/11)
intron_pos 322:0 (11/11)
BEGIN
1 MSGMGDGYVG TAQDAVRIRR LQKQREAERK KIQELKSKSA SGNDQSGLLQ FGTSSCEILD
61 TAFKKETVGL VTREEYVEKR VNIRNKFEEE EKEKLQKLQQ EEEELQLEKR NKKRKIKGSS
121 RLSFAEDFEN GSDEDDGENK SSGTGNLRCG KLGKDPSVET NFLPDSEREA EEQAERERLK
181 KQWLREQEQI KNEPLEITYS YWDGTGHRRV IQVRKGDPIG NFLRAVQQQL APDFREIRTA
241 SVENLLYVKE DLIIPHQHSF YELIINKARG KSGPLFHFDV HEDVRTIADA TIEKDESHAG
301 KVVERHWYEK NKHIFPASRW EIYDPTKKWE RYTVHGD
//