LOCUS AEC07066.1 271 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana expansin B1 protein.
ACCESSION CP002685-2274
PROTEIN_ID AEC07066.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="EXPB1"
/locus_tag="AT2G20750"
/gene_synonym="ATEXPB1"
/gene_synonym="ATHEXP BETA 1.5"
/gene_synonym="expansin B1"
/gene_synonym="F5H14.28"
/gene_synonym="F5H14_28"
/inference="Similar to RNA sequence,
EST:INSD:AU236632.2,INSD:DR287129.1,INSD:Z37641.1,
INSD:DR287128.1,INSD:DR287130.1,INSD:AU227587.1,
INSD:BP585954.1,INSD:AV561247.1,INSD:BP856013.1,
INSD:Z37642.1,INSD:AI997865.1,INSD:BP585724.1,
INSD:DR354225.1,INSD:DR379367.1,INSD:BP597667.1"
/inference="similar to RNA sequence,
mRNA:INSD:BT003932.1,INSD:BT005024.1,INSD:U95967.1,
INSD:AY084478.1"
/note="expansin B1 (EXPB1); INVOLVED IN: plant-type cell
wall organization, unidimensional cell growth, plant-type
cell wall loosening; LOCATED IN: endomembrane system,
extracellular region; EXPRESSED IN: 15 plant structures;
EXPRESSED DURING: 10 growth stages; CONTAINS InterPro
DOMAIN/s: Barwin-related endoglucanase
(InterPro:IPR009009), Pollen allergen, N-terminal
(InterPro:IPR014734), Rare lipoprotein A
(InterPro:IPR005132), Major pollen allergen Lol pI
(InterPro:IPR005795), Expansin/Lol pI
(InterPro:IPR007118), Expansin 45, endoglucanase-like
(InterPro:IPR007112), Pollen allergen/expansin, C-terminal
(InterPro:IPR007117); BEST Arabidopsis thaliana protein
match is: expansin B3 (TAIR:AT4G28250.1); Has 2076 Blast
hits to 2069 proteins in 143 species: Archae - 0; Bacteria
- 15; Metazoa - 0; Fungi - 9; Plants - 2024; Viruses - 0;
Other Eukaryotes - 28 (source: NCBI BLink)."
/db_xref="Araport:AT2G20750"
/db_xref="TAIR:AT2G20750"
intron_pos 58:1 (1/3)
intron_pos 161:2 (2/3)
intron_pos 205:0 (3/3)
BEGIN
1 MQLFPVILPT LCVFLHLLIS GSGSTPPLTH SNQQVAATRW LPATATWYGS AEGDGSSGGA
61 CGYGSLVDVK PFKARVGAVS PILFKGGEGC GACYKVRCLD KTICSKRAVT IIATDQSPSG
121 PSAKAKHTHF DLSGAAFGHM AIPGHNGVIR NRGLLNILYR RTACKYRGKN IAFHVNAGST
181 DYWLSLLIEY EDGEGDIGSM HIRQAGSKEW ISMKHIWGAN WCIVEGPLKG PFSVKLTTLS
241 NNKTLSATDV IPSNWVPKAT YTSRLNFSPV L
//