LOCUS AEC07064.1 180 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Tetraspanin family protein protein.
ACCESSION CP002685-2272
PROTEIN_ID AEC07064.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G20740"
/gene_synonym="AT2G20730"
/gene_synonym="F5H14.29"
/gene_synonym="F5H14_29"
/inference="Similar to RNA sequence,
EST:INSD:EH819675.1,INSD:BP781795.1,INSD:AV800207.1,
INSD:AV563473.1,INSD:EH982159.1,INSD:ES189248.1,
INSD:EL308300.1,INSD:ES059654.1,INSD:EH843849.1,
INSD:BP572191.1,INSD:BE037881.1,INSD:EH923720.1,
INSD:BP658754.1,INSD:EH918105.1,INSD:EH815949.1,
INSD:EL245458.1,INSD:BP607495.1,INSD:ES196832.1,
INSD:EH990280.1,INSD:EL275847.1,INSD:BP653314.1,
INSD:AV817975.1,INSD:AV784251.1,INSD:AV817726.1,
INSD:BP642678.1,INSD:BP637899.1,INSD:EH862839.1,
INSD:BP620137.1"
/inference="similar to RNA sequence,
mRNA:INSD:BX819852.1,INSD:BX842254.1"
/note="Tetraspanin family protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system, integral to membrane; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Tetraspanin (InterPro:IPR018499); BEST
Arabidopsis thaliana protein match is: Tetraspanin family
protein (TAIR:AT2G20230.1); Has 35333 Blast hits to 34131
proteins in 2444 species: Archae - 798; Bacteria - 22429;
Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0;
Other Eukaryotes - 9610 (source: NCBI BLink)."
/db_xref="Araport:AT2G20740"
/db_xref="TAIR:AT2G20740"
intron_pos 15:2 (1/4)
intron_pos 49:0 (2/4)
intron_pos 76:0 (3/4)
intron_pos 111:0 (4/4)
BEGIN
1 MGNLPFADSD HPVPWFIYSF LGLGAILCVV TCAGHIAAET VNGCCLYLYM GFIVLLTMVE
61 GGVVADIFLN RDWKKDFPED PSGAFHQFSK FIESNFKICK WIGLSIVCVQ GLSVLIAMLL
121 KALGPHPHRH YDSDDEYNVS TVALLQDARQ PPPYVVGEPM YGAKPGAWTV RLMKGQTGER
//