LOCUS AEC07059.1 490 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Tetratricopeptide repeat (TPR)-like
superfamily protein protein.
ACCESSION CP002685-2267
PROTEIN_ID AEC07059.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G20710"
/gene_synonym="F5H14.32"
/gene_synonym="F5H14_32"
/inference="Similar to RNA sequence,
EST:INSD:ES203968.1,INSD:EL968389.1,INSD:EG515192.1,
INSD:EG515191.1,INSD:ES016545.1,INSD:AI996845.1,
INSD:EL968991.1,INSD:ES159733.1,INSD:ES054914.1,
INSD:AV817496.1,INSD:ES063905.1"
/inference="similar to RNA sequence,
mRNA:INSD:BT015322.1,INSD:BX820712.1,INSD:BT029763.1"
/note="Tetratricopeptide repeat (TPR)-like superfamily
protein; INVOLVED IN: biological_process unknown; LOCATED
IN: mitochondrion; EXPRESSED IN: 15 plant structures;
EXPRESSED DURING: 7 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is:
Tetratricopeptide repeat (TPR)-like superfamily protein
(TAIR:AT1G28020.1); Has 11752 Blast hits to 6161 proteins
in 167 species: Archae - 2; Bacteria - 8; Metazoa - 34;
Fungi - 49; Plants - 11475; Viruses - 0; Other Eukaryotes
- 184 (source: NCBI BLink)."
/db_xref="Araport:AT2G20710"
/db_xref="TAIR:AT2G20710"
intron_pos 92:0 (1/1)
BEGIN
1 MKHLLLLRLV LPKPNYILRR SFLFHSGKTT PSPLDPYDTL QRRVARSGDP SASIIKVLDG
61 WLDQGNLVKT SELHSIIKML RKFSRFSHAL QISDWMSEHR VHEISEGDVA IRLDLIAKVG
121 GLGEAEKFFE TIPMERRNYH LYGALLNCYA SKKVLHKAEQ VFQEMKELGF LKGCLPYNVM
181 LNLYVRTGKY TMVEKLLREM EDETVKPDIF TVNTRLHAYS VVSDVEGMEK FLMRCEADQG
241 LHLDWRTYAD TANGYIKAGL TEKALEMLRK SEQMVNAQKR KHAYEVLMSF YGAAGKKEEV
301 YRLWSLYKEL DGFYNTGYIS VISALLKMDD IEEVEKIMEE WEAGHSLFDI RIPHLLITGY
361 CKKGMMEKAE EVVNILVQKW RVEDTSTWER LALGYKMAGK MEKAVEKWKR AIEVSKPGWR
421 PHQVVLMSCV DYLEGQRDME GLRKILRLLS ERGHISYDQL LYDMNGAGLS WKIVDAMGKG
481 RYVEEREVRI
//