LOCUS AEC07042.1 436 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Tyrosine transaminase family protein protein.
ACCESSION CP002685-2249
PROTEIN_ID AEC07042.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="SUR1"
/locus_tag="AT2G20610"
/gene_synonym="ABERRANT LATERAL ROOT FORMATION 1"
/gene_synonym="ALF1"
/gene_synonym="F23N11.7"
/gene_synonym="F23N11_7"
/gene_synonym="HLS3"
/gene_synonym="HOOKLESS 3"
/gene_synonym="ROOTY"
/gene_synonym="ROOTY 1"
/gene_synonym="RTY"
/gene_synonym="RTY1"
/gene_synonym="SUPERROOT 1"
/inference="Similar to RNA sequence,
EST:INSD:EL062102.1,INSD:ES155423.1,INSD:EG464356.1,
INSD:EL094889.1,INSD:EL066648.1,INSD:EG499357.1,
INSD:DR369935.1,INSD:EL015025.1,INSD:EH952803.1,
INSD:EL065853.1,INSD:EL222081.1,INSD:EL303468.1,
INSD:AV547908.1,INSD:AV827962.1,INSD:EH802154.1,
INSD:AV567298.1,INSD:EH946397.1,INSD:BP803572.1,
INSD:EG486509.1,INSD:EL320279.1,INSD:T76370.1,
INSD:EL126121.1,INSD:EL276932.1,INSD:EL230026.1,
INSD:EL123255.1,INSD:EL313459.1,INSD:EL238458.1,
INSD:EH985899.1,INSD:EL006217.1,INSD:EL272090.1,
INSD:EL235683.1,INSD:EL258524.1,INSD:EL023935.1,
INSD:EH981644.1,INSD:EG464357.1,INSD:EL188262.1,
INSD:EH932395.1,INSD:EH797032.1,INSD:EH936019.1,
INSD:BP863142.2,INSD:CF774424.1,INSD:EH974019.1,
INSD:EL334768.1,INSD:EL090106.1,INSD:EL140331.1,
INSD:BP867194.1,INSD:EH866474.1,INSD:EL248367.1,
INSD:EL328255.1,INSD:BP812391.1,INSD:EL258959.1,
INSD:CB262805.1,INSD:EH974825.1,INSD:EG464382.1,
INSD:EL162626.1,INSD:AV519400.1,INSD:EL191643.1,
INSD:EH859211.1,INSD:EH858277.1,INSD:AV825358.1,
INSD:EG464394.1,INSD:DR355622.1,INSD:EL000966.1"
/inference="similar to RNA sequence, mRNA:INSD:BX820228.1"
/note="SUPERROOT 1 (SUR1); FUNCTIONS IN:
S-alkylthiohydroximate lyase activity, carbon-sulfur lyase
activity, transaminase activity; INVOLVED IN: regulation
of cell growth by extracellular stimulus, glucosinolate
biosynthetic process, adventitious root development,
indoleacetic acid biosynthetic process; LOCATED IN:
membrane; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
1-aminocyclopropane-1-carboxylate synthase
(InterPro:IPR001176), Aminotransferase, class I/classII
(InterPro:IPR004839), Pyridoxal phosphate-dependent
transferase, major domain (InterPro:IPR015424), Tyrosine
transaminase (InterPro:IPR021178), Tyrosine/nicotianamine
aminotransferase (InterPro:IPR005958), Pyridoxal
phosphate-dependent transferase, major region, subdomain 1
(InterPro:IPR015421); BEST Arabidopsis thaliana protein
match is: Tyrosine transaminase family protein
(TAIR:AT4G28420.2); Has 35333 Blast hits to 34131 proteins
in 2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink)."
/db_xref="Araport:AT2G20610"
/db_xref="TAIR:AT2G20610"
intron_pos 115:2 (1/5)
intron_pos 229:0 (2/5)
intron_pos 302:0 (3/5)
intron_pos 322:0 (4/5)
intron_pos 374:0 (5/5)
BEGIN
1 MSEEQPHANL AVPAFKTEKE PITQTRNGQS SVWRFGGSDK AAKASTVTLR GVIYMLFDNC
61 GKDVNKTILP LGHGDPSVYP CFRTCIEAED AVVDVLRSGK GNSYGPGAGI LPARRAVADY
121 MNRDLPHKLT PEDIFLTAGC NQGIEIVFES LARPNANILL PRPGFPHYDA RAAYSGLEVR
181 KFDLLPEKEW EIDLEGIEAI ADENTVAMVV INPNNPCGNV YSHDHLKKVA ETARKLGIMV
241 ISDEVYDRTI FGDNPFVSMG KFASIVPVLT LAGISKGWVV PGWKIGWIAL NDPEGVFETT
301 KVLQSIKQNL DVTPDPATII QAALPAILEK ADKNFFAKKN KILKHNVDLV CDRLKDIPCV
361 VCPKKPESCT YLLTKLELSL MDNIKDDIDF CVKLAREENL VFLPGKIMKL SSMSLDLSFD
421 TKMGFVGNVL QGMLWV
//