LOCUS AEC06983.1 270 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Tetraspanin family protein protein.
ACCESSION CP002685-2162
PROTEIN_ID AEC06983.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G20230"
/gene_synonym="F11A3.22"
/gene_synonym="F11A3_22"
/inference="Similar to RNA sequence,
EST:INSD:EH797940.1,INSD:AV810810.1,INSD:ES029973.1,
INSD:EH887360.1,INSD:EL102391.1,INSD:DR235593.1,
INSD:DR235589.1,INSD:DR235603.1,INSD:EL215189.1,
INSD:DR235610.1,INSD:EH810033.1,INSD:BU635621.1,
INSD:EL124275.1,INSD:AV549646.1,INSD:CB261475.1,
INSD:EL007436.1,INSD:DR235564.1,INSD:AV442741.1,
INSD:ES191673.1,INSD:ES164305.1,INSD:DR235580.1,
INSD:EL023613.1,INSD:ES124461.1,INSD:AV806476.1,
INSD:EL259292.1,INSD:EG437031.1,INSD:AV539084.1,
INSD:EH991632.1,INSD:ES020989.1,INSD:ES198741.1,
INSD:EH884476.1,INSD:EH830592.1,INSD:EL274754.1,
INSD:DR235566.1,INSD:EL013090.1,INSD:EL288811.1,
INSD:EL010066.1,INSD:EL141016.1,INSD:EL183263.1,
INSD:AV537658.1,INSD:EL310402.1,INSD:DR235586.1,
INSD:DR235600.1,INSD:AV558791.1,INSD:EH799879.1,
INSD:N96998.1,INSD:DR235590.1,INSD:DR235573.1,
INSD:ES082624.1,INSD:ES111511.1,INSD:AV553690.1,
INSD:EH980284.1,INSD:DR235568.1,INSD:EH904944.1,
INSD:DR235605.1,INSD:EH913454.1,INSD:EH812396.1,
INSD:DR235579.1,INSD:DR235607.1,INSD:EL106259.1,
INSD:EL282526.1,INSD:BE038499.1,INSD:AV832191.1,
INSD:EG437020.1,INSD:AV557864.1,INSD:EL220086.1,
INSD:EL095812.1,INSD:DR235574.1,INSD:ES183481.1,
INSD:DR235597.1,INSD:DR235612.1,INSD:AV819574.1,
INSD:DR235613.1,INSD:DR235596.1,INSD:EL186347.1,
INSD:CB261168.1,INSD:AV441132.1,INSD:EH887342.1,
INSD:EL194470.1,INSD:ES018832.1,INSD:EL005529.1,
INSD:DR235571.1,INSD:EG437030.1,INSD:EH846544.1,
INSD:DR235584.1,INSD:EH988989.1,INSD:EL245283.1,
INSD:EH963362.1,INSD:EG437018.1,INSD:DR235577.1,
INSD:EH856749.1,INSD:DR235572.1,INSD:EH841666.1,
INSD:ES030638.1,INSD:AV534969.1,INSD:DR235592.1,
INSD:DR235581.1,INSD:BP629904.1,INSD:EL134744.1,
INSD:BE522435.1,INSD:DR235576.1,INSD:EL150381.1,
INSD:DR235601.1,INSD:EL984572.1,INSD:AV565044.1,
INSD:DR235587.1,INSD:BP808990.1,INSD:EL125718.1,
INSD:EL340271.1,INSD:DR235570.1,INSD:DR235599.1,
INSD:EL304066.1,INSD:EH830066.1,INSD:EH855811.1,
INSD:EL336396.1,INSD:DR235594.1,INSD:EL071346.1,
INSD:EH852843.1,INSD:ES200726.1,INSD:AV522288.1,
INSD:BX838387.1,INSD:EL144660.1,INSD:EL296373.1,
INSD:DR235567.1,INSD:EL079140.1,INSD:DR235578.1,
INSD:EL070963.1,INSD:EL205690.1,INSD:EH896256.1,
INSD:EL216856.1,INSD:R90647.1,INSD:AV553833.1,
INSD:EL123945.1,INSD:ES118040.1,INSD:DR235595.1,
INSD:EH973995.1,INSD:AV551433.1,INSD:AJ609385.1,
INSD:DR235608.1,INSD:EH875720.1,INSD:EL009928.1,
INSD:EG437036.1,INSD:DR235591.1,INSD:AV561552.1,
INSD:EL137441.1,INSD:DR235606.1,INSD:AV788232.1,
INSD:EL149699.1,INSD:ES151541.1,INSD:DR235585.1,
INSD:DR235602.1,INSD:ES134814.1,INSD:DR235583.1,
INSD:EL038360.1,INSD:EG437021.1,INSD:DR235598.1,
INSD:EL029084.1,INSD:DR235582.1,INSD:DR235609.1,
INSD:EL235611.1,INSD:DR235569.1,INSD:ES187665.1,
INSD:EH831047.1,INSD:DR235575.1,INSD:DR235604.1,
INSD:EL130708.1,INSD:DR235565.1,INSD:AI995237.1,
INSD:DR235611.1,INSD:DR235588.1,INSD:EL195773.1,
INSD:EL217409.1,INSD:EH875216.1,INSD:EH838489.1,
INSD:EL222176.1,INSD:EL077760.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY054570.1,INSD:BX821928.1,INSD:AY064662.1,
INSD:BX819958.1,INSD:BX821343.1,INSD:AY088475.1"
/note="Tetraspanin family protein; LOCATED IN: plasma
membrane, vacuole; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 16 growth stages; CONTAINS InterPro
DOMAIN/s: Tetraspanin (InterPro:IPR018499), Tetraspanin,
subgroup (InterPro:IPR000301); BEST Arabidopsis thaliana
protein match is: Tetraspanin family protein
(TAIR:AT4G28770.2); Has 161 Blast hits to 161 proteins in
17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 160; Viruses - 0; Other Eukaryotes - 1
(source: NCBI BLink)."
/db_xref="Araport:AT2G20230"
/db_xref="TAIR:AT2G20230"
intron_pos 99:2 (1/5)
intron_pos 133:0 (2/5)
intron_pos 160:0 (3/5)
intron_pos 195:0 (4/5)
intron_pos 258:0 (5/5)
BEGIN
1 MRRNCCHVSF ASTLKILNFV QAFIGVSIII YSIWMLHEYS RHLPVDPPPS ASSSSGTEIA
61 TSVSEPLKNP IDFVASIILG SNGGDHGFNL RSLDLPAPWF IYSFMAVGIL VCIVTFIGFI
121 AAEAINGCCL CFYSILKTLL ILLEAALVAY IAIDRHWEKD LPYDPTGELS SLRAFIEENI
181 DICKWVGIAV VAVQLLSLLL AMVLRAMVST PKPELDEEED DENPRSRTWD PLLGPQGNQA
241 PAGSSKIENW SSRIREKYGL NQSPPVNPKG
//