LOCUS AEC06974.1 401 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana NEP-interacting protein, putative
(DUF239) protein.
ACCESSION CP002685-2147
PROTEIN_ID AEC06974.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G20170"
/gene_synonym="T2G17.3"
/gene_synonym="T2G17_3"
/inference="Similar to RNA sequence,
EST:INSD:EG495266.1,INSD:EG495249.1,INSD:EG495257.1,
INSD:EG495258.1"
/note="Protein of Unknown Function (DUF239); FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; CONTAINS InterPro DOMAIN/s: Protein of unknown
function DUF239, plant (InterPro:IPR004314); BEST
Arabidopsis thaliana protein match is: Protein of Unknown
Function (DUF239) (TAIR:AT4G23390.1); Has 729 Blast hits
to 673 proteins in 27 species: Archae - 0; Bacteria - 13;
Metazoa - 0; Fungi - 10; Plants - 706; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink)."
/db_xref="Araport:AT2G20170"
/db_xref="TAIR:AT2G20170"
intron_pos 53:0 (1/6)
intron_pos 82:0 (2/6)
intron_pos 156:0 (3/6)
intron_pos 208:0 (4/6)
intron_pos 225:0 (5/6)
intron_pos 274:0 (6/6)
BEGIN
1 MRSCTKLILL NFFTITLILV TESRRTIPLK NEKQELKKLL NHINKPAIKS FQTKHGYILD
61 CIDIQKQLAF DHPLLKNHSI QLKPTIIPKW TRDKNTQKSS SLPFRQDEDI SCPHGTVIIK
121 RTTLEDLIQI QRLKYLGVKY TTSKDKDFLN MTGRHFAIAE YYRDNYGATG NINLWDPPVN
181 PDQFSLASIY VENGFRDSLQ SISAGWIVSP KLNQNNSGLF TYWTADGHEK TGCYNTVCPG
241 FVQVSSKLAL GTLARPTSTY DGEQYYLQAI IYQDNITGNW WFLIKNEPIG YWPKSLFHVQ
301 GLAYGASRVF WGGEVFSALR QSTSPLMGSG HFPKEGFKKA AFVNGLKVID REIEKIRSPP
361 VKDLRLFANS PKCYKVETKT GVGEEWSSAI FYGGPGGCTI T
//