LOCUS AEC06971.1 313 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Toll-Interleukin-Resistance (TIR)
domain family protein protein.
ACCESSION CP002685-2144
PROTEIN_ID AEC06971.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G20142"
/inference="Similar to RNA sequence,
EST:INSD:EL275761.1,INSD:EL028404.1,INSD:CB253785.1,
INSD:EH846965.1,INSD:U74123.1,INSD:EL176171.1,
INSD:BP850501.1,INSD:AV797324.1,INSD:BP854869.1,
INSD:BP866282.1"
/note="Toll-Interleukin-Resistance (TIR) domain family
protein; FUNCTIONS IN: transmembrane receptor activity;
INVOLVED IN: signal transduction, innate immune response;
LOCATED IN: intrinsic to membrane; EXPRESSED IN: 13 plant
structures; EXPRESSED DURING: 9 growth stages; CONTAINS
InterPro DOMAIN/s: Toll-Interleukin receptor
(InterPro:IPR000157); BEST Arabidopsis thaliana protein
match is: Disease resistance protein (TIR-NBS-LRR class)
family (TAIR:AT3G44480.1); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink)."
/db_xref="Araport:AT2G20142"
/db_xref="TAIR:AT2G20142"
intron_pos 151:2 (1/2)
intron_pos 176:0 (2/2)
BEGIN
1 MNSSPKMKHD VFISFRSKDT RDNFVSHLCG CLRRKRIKTF LYDELPADER YEESLKAIEV
61 SKISVIVFSE NFGDSRWCLD EVVAILKCKE KFGQIVIPVL YHVDPLDIEN QTGSFGDAFA
121 KRRDKAEQLQ EWKDSFTEAI NLPGWSTAYL SDEEMLVNGI AREIENKLLR ASRTKVMIEW
181 SLVITNLMLE IPSSVFDQIS SAHKPLYALA AMSMSLLSCL LCIVDLLHKG RVDRVVWKWT
241 WPIPWFHYQT QRSNRFGSFP EMLGLVCALC QTTITAVNYS FITRRDDTPI KFSVWPIMFA
301 LGLLCTLLIK RFR
//