LOCUS AEC06965.1 317 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana basic helix-loop-helix (bHLH) DNA-
binding superfamily protein protein.
ACCESSION CP002685-2136
PROTEIN_ID AEC06965.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G20100"
/gene_synonym="T2G17.10"
/gene_synonym="T2G17_10"
/inference="Similar to RNA sequence,
EST:INSD:EG419774.1,INSD:EG419199.1,INSD:DR381274.1,
INSD:EG419773.1,INSD:EG419772.1,INSD:EG419196.1,
INSD:EG419198.1,INSD:BP788335.1,INSD:EG419192.1,
INSD:AI995424.1,INSD:CD528959.1,INSD:EG419778.1,
INSD:DR225853.1,INSD:EG419174.1,INSD:DR225854.1,
INSD:EG419776.1,INSD:EG419195.1,INSD:BP779137.1,
INSD:EG419194.1"
/inference="similar to RNA sequence,
mRNA:INSD:AK221525.1,INSD:BT011701.1"
/note="basic helix-loop-helix (bHLH) DNA-binding
superfamily protein; FUNCTIONS IN: transcription regulator
activity; INVOLVED IN: regulation of transcription;
LOCATED IN: nucleus; EXPRESSED IN: 19 plant structures;
EXPRESSED DURING: 6 growth stages; CONTAINS InterPro
DOMAIN/s: Helix-loop-helix DNA-binding domain
(InterPro:IPR001092), Helix-loop-helix DNA-binding
(InterPro:IPR011598); BEST Arabidopsis thaliana protein
match is: basic helix-loop-helix (bHLH) DNA-binding
superfamily protein (TAIR:AT4G29100.1); Has 824 Blast hits
to 818 proteins in 44 species: Archae - 0; Bacteria - 0;
Metazoa - 20; Fungi - 6; Plants - 666; Viruses - 2; Other
Eukaryotes - 130 (source: NCBI BLink)."
/db_xref="Araport:AT2G20100"
/db_xref="TAIR:AT2G20100"
intron_pos 100:2 (1/6)
intron_pos 192:0 (2/6)
intron_pos 220:0 (3/6)
intron_pos 242:0 (4/6)
intron_pos 264:0 (5/6)
intron_pos 283:0 (6/6)
BEGIN
1 MNRGVLESSP VQHLTAAGNP NWWNNVSRGL RPPTPLMSHE PPSTTAFIPS LLPNFFSSPT
61 SSSSSSPSFP PPNSNPNFSS WLEMSDLPLD QPWSLSQLLL GGLMMGEEEK MEMMNHHHHQ
121 NQHQSYQAKR IQNWEEQVLR HQASMKQESS NNNSYGIMSS PNSPPNKSCA TIINTNEDNN
181 NNIHSGLNLS ECNSSEMIGS SFANKKPKLQ VPSSQSTLKV RKEKLGGRIA SLHQLVSPFG
241 KTDTASVLSE AIGYIRFLHS QIEALSLPYF GTPSRNNMMH QHAQRNMNGI FPEDPGQVRT
301 YIFLLSSFIY FTFYWIN
//